Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF44Q7L0R7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 AC138028.4-201ENST00000564984 1845 ntBASIC17.09■□□□□ 0.33
RNF44Q7L0R7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 AP000997.3-201ENST00000623333 2250 ntBASIC17.09■□□□□ 0.33
RNF44Q7L0R7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF44Q7L0R7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.08■□□□□ 0.33
RNF44Q7L0R7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 FOSL1P1-201ENST00000511041 816 ntBASIC17.08■□□□□ 0.32
RNF44Q7L0R7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 AC138894.3-201ENST00000603787 634 ntBASIC17.08■□□□□ 0.32
RNF44Q7L0R7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF44Q7L0R7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RNF44Q7L0R7 AC097374.2-201ENST00000618617 1306 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms