Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC149Q6ZUS6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 CROCCP3-202ENST00000420820 1947 ntBASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 SPDYE21P-201ENST00000413323 827 ntBASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AC023274.1-201ENST00000418278 595 ntBASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 DNAJB3-202ENST00000449667 1266 ntBASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AC073592.5-201ENST00000624854 528 ntBASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AC005593.1-201ENST00000624894 515 ntBASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 AL020996.1-203ENST00000536896 2307 ntBASIC18.65■□□□□ 0.58
CCDC149Q6ZUS6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC149Q6ZUS6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC149Q6ZUS6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC149Q6ZUS6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 AC211486.1-202ENST00000416371 468 ntBASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 AC211476.1-201ENST00000503899 468 ntBASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC149Q6ZUS6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC149Q6ZUS6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms