Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 DRAXINP1-201ENST00000437611 948 ntBASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 AP002383.4-201ENST00000442518 975 ntBASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 AL445228.2-201ENST00000605589 952 ntBASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COLCA1Q6ZS62 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 AC010331.1-201ENST00000611423 582 ntBASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 AL358472.4-201ENST00000633140 710 ntBASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COLCA1Q6ZS62 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COLCA1Q6ZS62 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms