Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 MTDHP4-201ENST00000600287 670 ntBASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 AC073592.5-201ENST00000624854 528 ntBASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 IL9RP2-201ENST00000423948 1312 ntBASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC27A1Q6PCB7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 SPDYE21P-201ENST00000413323 827 ntBASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 RPS2P1-201ENST00000434010 821 ntBASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 OR7E14P-202ENST00000530490 1290 ntBASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 AL049840.3-201ENST00000602669 611 ntBASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 AC019129.2-201ENST00000609837 1235 ntBASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 SIGLEC16-201ENST00000599858 1437 ntBASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC27A1Q6PCB7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 BX005266.1-201ENST00000473402 457 ntBASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 AC139887.3-201ENST00000568585 713 ntBASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SLC27A1Q6PCB7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
SLC27A1Q6PCB7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms