Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 KRT18P1-202ENST00000452408 1331 ntBASIC18.7■□□□□ 0.58
RNF43Q68DV7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 TSPY19P-201ENST00000418461 509 ntBASIC18.69■□□□□ 0.58
RNF43Q68DV7 TSPY18P-201ENST00000441642 509 ntBASIC18.69■□□□□ 0.58
RNF43Q68DV7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 AL592071.1-201ENST00000611956 408 ntBASIC18.69■□□□□ 0.58
RNF43Q68DV7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF43Q68DV7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF43Q68DV7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 LINC01126-201ENST00000623515 1646 ntBASIC18.68■□□□□ 0.58
RNF43Q68DV7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 AC079781.3-201ENST00000449110 356 ntBASIC18.68■□□□□ 0.58
RNF43Q68DV7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF43Q68DV7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF43Q68DV7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RNF43Q68DV7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF43Q68DV7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF43Q68DV7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
RNF43Q68DV7 AL662844.1-201ENST00000546340 181 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms