Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 KRT18P41-201ENST00000518924 1277 ntBASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC144BQ3MJ40 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 GNAS-203ENST00000306120 1878 ntBASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC144BQ3MJ40 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 PRORSD1P-202ENST00000563365 2154 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 AP000593.1-201ENST00000393668 712 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 POM121L3P-201ENST00000419331 1163 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 BNIP3P18-201ENST00000593976 575 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 AC120114.3-201ENST00000611923 658 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 BX640515.1-201ENST00000617215 977 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 TP73-AS1-207ENST00000624167 988 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 AC080080.1-201ENST00000625121 2420 ntBASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC144BQ3MJ40 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 GPALPP1-207ENST00000611650 899 ntBASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC144BQ3MJ40 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms