Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC006504.4-201ENST00000592118 1568 ntBASIC18.81■□□□□ 0.6
UBE3AQ05086 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBE3AQ05086 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
UBE3AQ05086 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
UBE3AQ05086 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE3AQ05086 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UBE3AQ05086 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
UBE3AQ05086 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
UBE3AQ05086 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.8■□□□□ 0.6
UBE3AQ05086 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE3AQ05086 HCG4B-203ENST00000450128 991 ntBASIC18.8■□□□□ 0.6
UBE3AQ05086 AC108073.2-201ENST00000464002 357 ntBASIC18.8■□□□□ 0.6
UBE3AQ05086 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.8■□□□□ 0.6
UBE3AQ05086 MIR4751-201ENST00000578027 74 ntBASIC18.8■□□□□ 0.6
UBE3AQ05086 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.8■□□□□ 0.6
UBE3AQ05086 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
UBE3AQ05086 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBE3AQ05086 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 AC005082.1-201ENST00000413042 2259 ntBASIC18.79■□□□□ 0.6
UBE3AQ05086 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBE3AQ05086 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UBE3AQ05086 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBE3AQ05086 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.79■□□□□ 0.6
UBE3AQ05086 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.79■□□□□ 0.6
UBE3AQ05086 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE3AQ05086 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE3AQ05086 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBE3AQ05086 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.79■□□□□ 0.6
UBE3AQ05086 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBE3AQ05086 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBE3AQ05086 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UBE3AQ05086 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBE3AQ05086 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 AC090340.1-201ENST00000620778 4980 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBE3AQ05086 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBE3AQ05086 AC003669.1-201ENST00000334569 611 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE3AQ05086 HTR5BP-201ENST00000430851 1154 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 SIGLEC30P-201ENST00000455569 941 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 ALG1L5P-201ENST00000482043 771 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 RPS15P9-201ENST00000494093 319 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE3AQ05086 RFPL4AP1-201ENST00000530883 850 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
UBE3AQ05086 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.78■□□□□ 0.6
UBE3AQ05086 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE3AQ05086 AC092865.6-201ENST00000642101 219 ntBASIC18.78■□□□□ 0.6
UBE3AQ05086 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE3AQ05086 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
UBE3AQ05086 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3AQ05086 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBE3AQ05086 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBE3AQ05086 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
UBE3AQ05086 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.78■□□□□ 0.6
UBE3AQ05086 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
UBE3AQ05086 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
UBE3AQ05086 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 AL049757.1-201ENST00000616842 1596 ntBASIC18.77■□□□□ 0.6
UBE3AQ05086 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UBE3AQ05086 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UBE3AQ05086 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
UBE3AQ05086 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
UBE3AQ05086 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms