Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 AC022188.1-201ENST00000620960 1664 ntBASIC14.04□□□□□ -0.16
CCL20P78556 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CCL20P78556 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL20P78556 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.04□□□□□ -0.16
CCL20P78556 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.04□□□□□ -0.16
CCL20P78556 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL20P78556 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL20P78556 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL20P78556 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL20P78556 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL20P78556 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL20P78556 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL20P78556 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL20P78556 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 AC016769.1-201ENST00000409132 1010 ntBASIC14.03□□□□□ -0.16
CCL20P78556 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 AC009102.3-201ENST00000623118 1491 ntBASIC14.03□□□□□ -0.16
CCL20P78556 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL20P78556 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL20P78556 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 CYP2T1P-202ENST00000641596 2535 ntBASIC14.03□□□□□ -0.16
CCL20P78556 AL136379.1-201ENST00000623471 2642 ntBASIC14.03□□□□□ -0.16
CCL20P78556 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL20P78556 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCL20P78556 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CCL20P78556 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.02□□□□□ -0.16
CCL20P78556 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CCL20P78556 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL20P78556 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 AL163051.1-201ENST00000569214 1512 ntBASIC14.02□□□□□ -0.16
CCL20P78556 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCL20P78556 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL20P78556 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms