Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.75■□□□□ 0.27
RPS3AP61247 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS3AP61247 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RPS3AP61247 AC068587.9-201ENST00000641814 219 ntBASIC16.75■□□□□ 0.27
RPS3AP61247 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS3AP61247 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 HEIH-201ENST00000623091 1652 ntBASIC16.75■□□□□ 0.27
RPS3AP61247 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS3AP61247 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPS3AP61247 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RPS3AP61247 AC034236.2-201ENST00000606662 1610 ntBASIC16.74■□□□□ 0.27
RPS3AP61247 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RPS3AP61247 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 FAM8A6P-201ENST00000407496 1135 ntBASIC16.74■□□□□ 0.27
RPS3AP61247 KRT18P23-201ENST00000435622 1283 ntBASIC16.74■□□□□ 0.27
RPS3AP61247 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS3AP61247 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS3AP61247 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.74■□□□□ 0.27
RPS3AP61247 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS3AP61247 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.74■□□□□ 0.27
RPS3AP61247 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.74■□□□□ 0.27
RPS3AP61247 AL441883.1-201ENST00000566170 1045 ntBASIC16.74■□□□□ 0.27
RPS3AP61247 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.74■□□□□ 0.27
RPS3AP61247 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RPS3AP61247 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 FLJ38576-201ENST00000623820 2459 ntBASIC16.74■□□□□ 0.27
RPS3AP61247 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS3AP61247 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS3AP61247 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS3AP61247 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RPS3AP61247 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS3AP61247 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS3AP61247 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RPS3AP61247 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RPS3AP61247 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RPS3AP61247 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RPS3AP61247 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.73■□□□□ 0.27
RPS3AP61247 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RPS3AP61247 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPS3AP61247 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RPS3AP61247 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPS3AP61247 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.72■□□□□ 0.27
RPS3AP61247 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms