Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB38P57729 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB38P57729 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 POM121L3P-201ENST00000419331 1163 ntBASIC16.75■□□□□ 0.27
RAB38P57729 NUS1P1-201ENST00000446295 882 ntBASIC16.75■□□□□ 0.27
RAB38P57729 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB38P57729 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB38P57729 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB38P57729 KRT18P56-201ENST00000507275 550 ntBASIC16.75■□□□□ 0.27
RAB38P57729 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 AC096582.2-201ENST00000510860 516 ntBASIC16.75■□□□□ 0.27
RAB38P57729 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB38P57729 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.75■□□□□ 0.27
RAB38P57729 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB38P57729 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 AC010460.3-201ENST00000511359 1579 ntBASIC16.75■□□□□ 0.27
RAB38P57729 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB38P57729 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB38P57729 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB38P57729 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB38P57729 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB38P57729 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB38P57729 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RAB38P57729 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 AC011467.2-201ENST00000598425 242 ntBASIC16.74■□□□□ 0.27
RAB38P57729 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB38P57729 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RAB38P57729 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB38P57729 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB38P57729 TP73-AS1-210ENST00000637775 1455 ntBASIC16.73■□□□□ 0.27
RAB38P57729 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RAB38P57729 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB38P57729 COX5BP2-201ENST00000392354 334 ntBASIC16.73■□□□□ 0.27
RAB38P57729 FAM220CP-201ENST00000395253 831 ntBASIC16.73■□□□□ 0.27
RAB38P57729 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB38P57729 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB38P57729 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB38P57729 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB38P57729 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB38P57729 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.73■□□□□ 0.27
RAB38P57729 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.73■□□□□ 0.27
RAB38P57729 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RAB38P57729 AC114341.1-201ENST00000618070 349 ntBASIC16.73■□□□□ 0.27
RAB38P57729 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.73■□□□□ 0.27
RAB38P57729 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB38P57729 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms