Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP1S2P56377 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
AP1S2P56377 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.36■□□□□ 0.37
AP1S2P56377 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.36■□□□□ 0.37
AP1S2P56377 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
AP1S2P56377 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.36■□□□□ 0.37
AP1S2P56377 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.36■□□□□ 0.37
AP1S2P56377 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S2P56377 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.36■□□□□ 0.37
AP1S2P56377 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.35■□□□□ 0.37
AP1S2P56377 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.35■□□□□ 0.37
AP1S2P56377 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.35■□□□□ 0.37
AP1S2P56377 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
AP1S2P56377 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.35■□□□□ 0.37
AP1S2P56377 RN7SL606P-201ENST00000472779 293 ntBASIC17.35■□□□□ 0.37
AP1S2P56377 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP1S2P56377 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.35■□□□□ 0.37
AP1S2P56377 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.35■□□□□ 0.37
AP1S2P56377 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
AP1S2P56377 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
AP1S2P56377 LINC01451-201ENST00000623792 534 ntBASIC17.35■□□□□ 0.37
AP1S2P56377 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.35■□□□□ 0.37
AP1S2P56377 AC005332.1-201ENST00000577698 1310 ntBASIC17.35■□□□□ 0.37
AP1S2P56377 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.35■□□□□ 0.37
AP1S2P56377 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP1S2P56377 BX276092.7-203ENST00000637198 1536 ntBASIC17.35■□□□□ 0.37
AP1S2P56377 AC133963.1-201ENST00000504166 1679 ntBASIC17.35■□□□□ 0.37
AP1S2P56377 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
AP1S2P56377 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
AP1S2P56377 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.35■□□□□ 0.37
AP1S2P56377 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S2P56377 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
AP1S2P56377 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.34■□□□□ 0.37
AP1S2P56377 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
AP1S2P56377 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 AC096633.1-201ENST00000422446 749 ntBASIC17.34■□□□□ 0.37
AP1S2P56377 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 FAM86EP-206ENST00000510506 987 ntBASIC17.34■□□□□ 0.37
AP1S2P56377 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.34■□□□□ 0.37
AP1S2P56377 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
AP1S2P56377 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.34■□□□□ 0.37
AP1S2P56377 AC097374.2-201ENST00000618617 1306 ntBASIC17.34■□□□□ 0.37
AP1S2P56377 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.34■□□□□ 0.37
AP1S2P56377 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.34■□□□□ 0.37
AP1S2P56377 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S2P56377 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
AP1S2P56377 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
AP1S2P56377 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S2P56377 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S2P56377 AL355312.1-201ENST00000407115 2176 ntBASIC17.33■□□□□ 0.37
AP1S2P56377 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S2P56377 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
AP1S2P56377 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.33■□□□□ 0.37
AP1S2P56377 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S2P56377 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.33■□□□□ 0.37
AP1S2P56377 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S2P56377 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.33■□□□□ 0.37
AP1S2P56377 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S2P56377 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S2P56377 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S2P56377 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms