Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC093503.3-201ENST00000624917 2352 ntBASIC13.05□□□□□ -0.32
APOC4P55056 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.05□□□□□ -0.32
APOC4P55056 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 AF186996.4-201ENST00000467186 377 ntBASIC13.05□□□□□ -0.32
APOC4P55056 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.05□□□□□ -0.32
APOC4P55056 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
APOC4P55056 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
APOC4P55056 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
APOC4P55056 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.04□□□□□ -0.32
APOC4P55056 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC4P55056 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC4P55056 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC4P55056 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC4P55056 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOC4P55056 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 AC098818.2-201ENST00000564925 2320 ntBASIC13.04□□□□□ -0.32
APOC4P55056 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOC4P55056 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC4P55056 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 AC096633.1-201ENST00000422446 749 ntBASIC13.04□□□□□ -0.32
APOC4P55056 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.04□□□□□ -0.32
APOC4P55056 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 AC093909.1-201ENST00000504731 1122 ntBASIC13.04□□□□□ -0.32
APOC4P55056 AC073648.2-201ENST00000510116 352 ntBASIC13.04□□□□□ -0.32
APOC4P55056 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.04□□□□□ -0.32
APOC4P55056 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.04□□□□□ -0.32
APOC4P55056 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
APOC4P55056 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.04□□□□□ -0.32
APOC4P55056 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC4P55056 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC4P55056 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC4P55056 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.04□□□□□ -0.32
APOC4P55056 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC4P55056 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOC4P55056 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC4P55056 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
APOC4P55056 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOC4P55056 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.03□□□□□ -0.32
APOC4P55056 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 AC090164.3-201ENST00000610780 2143 ntBASIC13.03□□□□□ -0.32
APOC4P55056 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 AKR1C7P-201ENST00000305623 895 ntBASIC13.03□□□□□ -0.32
APOC4P55056 RPS2P28-201ENST00000314255 741 ntBASIC13.03□□□□□ -0.32
APOC4P55056 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.03□□□□□ -0.32
APOC4P55056 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms