Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN5P54829 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN5P54829 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN5P54829 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PTPN5P54829 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PTPN5P54829 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN5P54829 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PTPN5P54829 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PTPN5P54829 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN5P54829 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN5P54829 PRSS29P-201ENST00000440800 595 ntBASIC18.36■□□□□ 0.53
PTPN5P54829 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN5P54829 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN5P54829 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.36■□□□□ 0.53
PTPN5P54829 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTPN5P54829 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN5P54829 MIR4745-201ENST00000577608 62 ntBASIC18.36■□□□□ 0.53
PTPN5P54829 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN5P54829 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN5P54829 AC002310.6-201ENST00000624451 1377 ntBASIC18.36■□□□□ 0.53
PTPN5P54829 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTPN5P54829 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN5P54829 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 AP002414.3-201ENST00000589352 1468 ntBASIC18.35■□□□□ 0.53
PTPN5P54829 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 AC009533.2-201ENST00000543664 586 ntBASIC18.35■□□□□ 0.53
PTPN5P54829 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 AL139288.1-201ENST00000623748 933 ntBASIC18.35■□□□□ 0.53
PTPN5P54829 C20orf181-201ENST00000623918 480 ntBASIC18.35■□□□□ 0.53
PTPN5P54829 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.35■□□□□ 0.53
PTPN5P54829 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN5P54829 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN5P54829 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN5P54829 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN5P54829 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN5P54829 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN5P54829 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN5P54829 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN5P54829 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN5P54829 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN5P54829 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN5P54829 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN5P54829 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.34■□□□□ 0.53
PTPN5P54829 AC107918.4-202ENST00000641623 219 ntBASIC18.34■□□□□ 0.53
PTPN5P54829 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms