Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC011840.4-201ENST00000578471 627 ntBASIC19.05■□□□□ 0.64
RAD23BP54727 AP005901.3-202ENST00000581653 237 ntBASIC19.05■□□□□ 0.64
RAD23BP54727 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 AC092119.3-201ENST00000612618 583 ntBASIC19.05■□□□□ 0.64
RAD23BP54727 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.05■□□□□ 0.64
RAD23BP54727 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RAD23BP54727 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RAD23BP54727 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.05■□□□□ 0.64
RAD23BP54727 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RAD23BP54727 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RAD23BP54727 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.05■□□□□ 0.64
RAD23BP54727 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAD23BP54727 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.04■□□□□ 0.64
RAD23BP54727 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD23BP54727 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RAD23BP54727 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
RAD23BP54727 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD23BP54727 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD23BP54727 AC005336.2-201ENST00000593183 939 ntBASIC19.04■□□□□ 0.64
RAD23BP54727 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.04■□□□□ 0.64
RAD23BP54727 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RAD23BP54727 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 AC068880.1-201ENST00000507289 2297 ntBASIC19.04■□□□□ 0.64
RAD23BP54727 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.04■□□□□ 0.64
RAD23BP54727 AC233702.3-201ENST00000578656 1387 ntBASIC19.04■□□□□ 0.64
RAD23BP54727 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.04■□□□□ 0.64
RAD23BP54727 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAD23BP54727 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.03■□□□□ 0.64
RAD23BP54727 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.03■□□□□ 0.64
RAD23BP54727 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAD23BP54727 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 AC246785.2-201ENST00000432512 513 ntBASIC19.03■□□□□ 0.64
RAD23BP54727 TOB2P1-201ENST00000469761 992 ntBASIC19.03■□□□□ 0.64
RAD23BP54727 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.03■□□□□ 0.64
RAD23BP54727 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.03■□□□□ 0.64
RAD23BP54727 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.03■□□□□ 0.64
RAD23BP54727 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.03■□□□□ 0.64
RAD23BP54727 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.03■□□□□ 0.64
RAD23BP54727 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.03■□□□□ 0.64
RAD23BP54727 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.03■□□□□ 0.64
RAD23BP54727 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.03■□□□□ 0.64
RAD23BP54727 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RAD23BP54727 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.03■□□□□ 0.64
RAD23BP54727 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAD23BP54727 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms