Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 KRT16P4-201ENST00000453883 522 ntBASIC18.87■□□□□ 0.61
CACNA2D1P54289 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CACNA2D1P54289 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CACNA2D1P54289 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 POM121L3P-201ENST00000419331 1163 ntBASIC18.86■□□□□ 0.61
CACNA2D1P54289 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 AC079781.3-201ENST00000449110 356 ntBASIC18.86■□□□□ 0.61
CACNA2D1P54289 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 AC135050.7-201ENST00000624508 2218 ntBASIC18.86■□□□□ 0.61
CACNA2D1P54289 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.86■□□□□ 0.61
CACNA2D1P54289 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CACNA2D1P54289 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 AC106820.2-201ENST00000563775 3264 ntBASIC18.85■□□□□ 0.61
CACNA2D1P54289 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 AC010460.3-201ENST00000511359 1579 ntBASIC18.85■□□□□ 0.61
CACNA2D1P54289 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNA2D1P54289 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 AC011467.2-201ENST00000598425 242 ntBASIC18.85■□□□□ 0.61
CACNA2D1P54289 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNA2D1P54289 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms