Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.58■□□□□ 0.4
LIMK1P53667 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.58■□□□□ 0.4
LIMK1P53667 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.58■□□□□ 0.4
LIMK1P53667 KRT18P2-201ENST00000447938 1258 ntBASIC17.58■□□□□ 0.4
LIMK1P53667 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.58■□□□□ 0.4
LIMK1P53667 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.58■□□□□ 0.4
LIMK1P53667 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.58■□□□□ 0.4
LIMK1P53667 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.58■□□□□ 0.4
LIMK1P53667 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LIMK1P53667 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 AP000867.4-201ENST00000641616 219 ntBASIC17.58■□□□□ 0.4
LIMK1P53667 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LIMK1P53667 BICD1-207ENST00000551848 1962 ntBASIC17.58■□□□□ 0.4
LIMK1P53667 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LIMK1P53667 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LIMK1P53667 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LIMK1P53667 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK1P53667 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK1P53667 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK1P53667 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK1P53667 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK1P53667 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK1P53667 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK1P53667 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.57■□□□□ 0.4
LIMK1P53667 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK1P53667 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK1P53667 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 NOC2LP1-202ENST00000452600 2235 ntBASIC17.57■□□□□ 0.4
LIMK1P53667 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK1P53667 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK1P53667 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK1P53667 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
LIMK1P53667 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK1P53667 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.56■□□□□ 0.4
LIMK1P53667 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK1P53667 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LIMK1P53667 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK1P53667 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK1P53667 AC097374.2-201ENST00000618617 1306 ntBASIC17.56■□□□□ 0.4
LIMK1P53667 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK1P53667 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LIMK1P53667 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK1P53667 BCRP1-201ENST00000444246 691 ntBASIC17.56■□□□□ 0.4
LIMK1P53667 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.56■□□□□ 0.4
LIMK1P53667 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.56■□□□□ 0.4
LIMK1P53667 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LIMK1P53667 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK1P53667 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.56■□□□□ 0.4
LIMK1P53667 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.56■□□□□ 0.4
LIMK1P53667 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
LIMK1P53667 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.56■□□□□ 0.4
LIMK1P53667 AL022326.1-202ENST00000641533 845 ntBASIC17.56■□□□□ 0.4
LIMK1P53667 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK1P53667 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LIMK1P53667 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK1P53667 ELL2P1-201ENST00000413990 1906 ntBASIC17.56■□□□□ 0.4
LIMK1P53667 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK1P53667 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK1P53667 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK1P53667 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
LIMK1P53667 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LIMK1P53667 AL354751.1-201ENST00000412768 1863 ntBASIC17.55■□□□□ 0.4
LIMK1P53667 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK1P53667 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK1P53667 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK1P53667 MIR149-201ENST00000384879 89 ntBASIC17.55■□□□□ 0.4
LIMK1P53667 AC073621.1-201ENST00000392730 636 ntBASIC17.55■□□□□ 0.4
LIMK1P53667 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK1P53667 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK1P53667 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
LIMK1P53667 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK1P53667 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LIMK1P53667 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LIMK1P53667 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK1P53667 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK1P53667 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK1P53667 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
LIMK1P53667 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms