Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCA4P51532 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCA4P51532 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SMARCA4P51532 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCA4P51532 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCA4P51532 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
SMARCA4P51532 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC31.59■■■□□ 2.65
SMARCA4P51532 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SMARCA4P51532 RBM7-207ENST00000544582 692 ntTSL 3 BASIC31.59■■■□□ 2.65
SMARCA4P51532 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
SMARCA4P51532 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC31.58■■■□□ 2.65
SMARCA4P51532 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC31.58■■■□□ 2.65
SMARCA4P51532 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC31.58■■■□□ 2.65
SMARCA4P51532 AC002558.1-201ENST00000488906 803 ntBASIC31.58■■■□□ 2.65
SMARCA4P51532 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC31.58■■■□□ 2.65
SMARCA4P51532 YTHDF3-AS1-201ENST00000603538 718 ntBASIC31.58■■■□□ 2.65
SMARCA4P51532 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SMARCA4P51532 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC31.58■■■□□ 2.65
SMARCA4P51532 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
SMARCA4P51532 HLA-J-202ENST00000469281 1241 ntBASIC31.57■■■□□ 2.64
SMARCA4P51532 AC093214.1-201ENST00000511688 1107 ntBASIC31.57■■■□□ 2.64
SMARCA4P51532 AC112191.1-201ENST00000523689 701 ntBASIC31.57■■■□□ 2.64
SMARCA4P51532 RPL28-209ENST00000560055 670 ntTSL 3 BASIC31.57■■■□□ 2.64
SMARCA4P51532 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA4P51532 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC31.57■■■□□ 2.64
SMARCA4P51532 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA4P51532 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC31.57■■■□□ 2.64
SMARCA4P51532 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCA4P51532 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC31.57■■■□□ 2.64
SMARCA4P51532 AC087163.2-201ENST00000457299 853 ntBASIC31.57■■■□□ 2.64
SMARCA4P51532 AC067863.1-201ENST00000494933 530 ntBASIC31.57■■■□□ 2.64
SMARCA4P51532 AC069262.1-201ENST00000539058 672 ntBASIC31.57■■■□□ 2.64
SMARCA4P51532 AC025678.2-201ENST00000562061 970 ntBASIC31.57■■■□□ 2.64
SMARCA4P51532 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC31.57■■■□□ 2.64
SMARCA4P51532 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC31.56■■■□□ 2.64
SMARCA4P51532 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA4P51532 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
SMARCA4P51532 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
SMARCA4P51532 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC31.56■■■□□ 2.64
SMARCA4P51532 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA4P51532 AC073592.3-201ENST00000625118 1834 ntBASIC31.56■■■□□ 2.64
SMARCA4P51532 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC31.56■■■□□ 2.64
SMARCA4P51532 AC092474.2-201ENST00000424288 719 ntBASIC31.56■■■□□ 2.64
SMARCA4P51532 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SMARCA4P51532 KRT8P48-201ENST00000515599 1220 ntBASIC31.56■■■□□ 2.64
SMARCA4P51532 AC087641.1-201ENST00000557561 1021 ntBASIC31.56■■■□□ 2.64
SMARCA4P51532 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA4P51532 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA4P51532 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCA4P51532 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
SMARCA4P51532 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC31.55■■■□□ 2.64
SMARCA4P51532 AC009949.1-201ENST00000623048 1830 ntBASIC31.55■■■□□ 2.64
SMARCA4P51532 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
SMARCA4P51532 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC31.55■■■□□ 2.64
SMARCA4P51532 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC31.55■■■□□ 2.64
SMARCA4P51532 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC31.55■■■□□ 2.64
SMARCA4P51532 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC31.55■■■□□ 2.64
SMARCA4P51532 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC31.55■■■□□ 2.64
SMARCA4P51532 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SMARCA4P51532 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC31.55■■■□□ 2.64
SMARCA4P51532 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC31.55■■■□□ 2.64
SMARCA4P51532 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMARCA4P51532 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCA4P51532 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCA4P51532 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCA4P51532 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC31.54■■■□□ 2.64
SMARCA4P51532 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC31.54■■■□□ 2.64
SMARCA4P51532 GPS2P2-201ENST00000430745 888 ntBASIC31.54■■■□□ 2.64
SMARCA4P51532 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCA4P51532 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC31.54■■■□□ 2.64
SMARCA4P51532 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC31.54■■■□□ 2.64
SMARCA4P51532 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC31.54■■■□□ 2.64
SMARCA4P51532 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCA4P51532 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SMARCA4P51532 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms