Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.66■□□□□ 0.74
CPT1AP50416 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CPT1AP50416 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.65■□□□□ 0.74
CPT1AP50416 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CPT1AP50416 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.65■□□□□ 0.74
CPT1AP50416 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.65■□□□□ 0.74
CPT1AP50416 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.65■□□□□ 0.74
CPT1AP50416 AC108073.2-201ENST00000464002 357 ntBASIC19.65■□□□□ 0.74
CPT1AP50416 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 RPS15P9-201ENST00000494093 319 ntBASIC19.65■□□□□ 0.74
CPT1AP50416 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.65■□□□□ 0.74
CPT1AP50416 AC008667.4-201ENST00000607370 168 ntBASIC19.65■□□□□ 0.74
CPT1AP50416 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 BX276092.7-203ENST00000637198 1536 ntBASIC19.65■□□□□ 0.74
CPT1AP50416 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.65■□□□□ 0.74
CPT1AP50416 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPT1AP50416 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.65■□□□□ 0.74
CPT1AP50416 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CPT1AP50416 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.64■□□□□ 0.73
CPT1AP50416 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CPT1AP50416 PRSS29P-201ENST00000440800 595 ntBASIC19.64■□□□□ 0.73
CPT1AP50416 VN2R19P-201ENST00000442399 1052 ntBASIC19.64■□□□□ 0.73
CPT1AP50416 DNAJB3-202ENST00000449667 1266 ntBASIC19.64■□□□□ 0.73
CPT1AP50416 IGHV3-65-201ENST00000523210 341 ntBASIC19.64■□□□□ 0.73
CPT1AP50416 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.64■□□□□ 0.73
CPT1AP50416 AC005829.1-201ENST00000570002 483 ntBASIC19.64■□□□□ 0.73
CPT1AP50416 AC109462.3-201ENST00000573934 613 ntBASIC19.64■□□□□ 0.73
CPT1AP50416 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.64■□□□□ 0.73
CPT1AP50416 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.64■□□□□ 0.73
CPT1AP50416 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.64■□□□□ 0.73
CPT1AP50416 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPT1AP50416 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.63■□□□□ 0.73
CPT1AP50416 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.63■□□□□ 0.73
CPT1AP50416 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CPT1AP50416 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.63■□□□□ 0.73
CPT1AP50416 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CPT1AP50416 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 DDX43P3-201ENST00000441064 443 ntBASIC19.63■□□□□ 0.73
CPT1AP50416 AP006288.1-201ENST00000446065 395 ntBASIC19.63■□□□□ 0.73
CPT1AP50416 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.63■□□□□ 0.73
CPT1AP50416 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 IGHV3-52-201ENST00000519770 353 ntBASIC19.63■□□□□ 0.73
CPT1AP50416 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPT1AP50416 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CPT1AP50416 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.62■□□□□ 0.73
CPT1AP50416 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.62■□□□□ 0.73
CPT1AP50416 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.62■□□□□ 0.73
CPT1AP50416 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.62■□□□□ 0.73
CPT1AP50416 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.62■□□□□ 0.73
CPT1AP50416 STK19B-204ENST00000512515 211 ntBASIC19.62■□□□□ 0.73
CPT1AP50416 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms