Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.29■□□□□ 0.84
VEGFBP49765 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFBP49765 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFBP49765 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
VEGFBP49765 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
VEGFBP49765 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFBP49765 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.28■□□□□ 0.84
VEGFBP49765 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFBP49765 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.28■□□□□ 0.84
VEGFBP49765 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.28■□□□□ 0.84
VEGFBP49765 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
VEGFBP49765 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
VEGFBP49765 ACA64.2-201ENST00000459014 129 ntBASIC20.28■□□□□ 0.84
VEGFBP49765 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VEGFBP49765 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.28■□□□□ 0.84
VEGFBP49765 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFBP49765 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.28■□□□□ 0.84
VEGFBP49765 MIR6080-201ENST00000617359 66 ntBASIC20.28■□□□□ 0.84
VEGFBP49765 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.28■□□□□ 0.84
VEGFBP49765 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
VEGFBP49765 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VEGFBP49765 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFBP49765 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VEGFBP49765 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFBP49765 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.27■□□□□ 0.84
VEGFBP49765 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFBP49765 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFBP49765 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.27■□□□□ 0.84
VEGFBP49765 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFBP49765 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
VEGFBP49765 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.27■□□□□ 0.84
VEGFBP49765 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.27■□□□□ 0.84
VEGFBP49765 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.27■□□□□ 0.84
VEGFBP49765 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.27■□□□□ 0.84
VEGFBP49765 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VEGFBP49765 TP53TG3HP-202ENST00000569755 579 ntBASIC20.27■□□□□ 0.84
VEGFBP49765 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.27■□□□□ 0.84
VEGFBP49765 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFBP49765 MIR6805-201ENST00000615055 62 ntBASIC20.27■□□□□ 0.84
VEGFBP49765 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VEGFBP49765 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
VEGFBP49765 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
VEGFBP49765 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VEGFBP49765 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
VEGFBP49765 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VEGFBP49765 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.27■□□□□ 0.83
VEGFBP49765 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
VEGFBP49765 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFBP49765 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFBP49765 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFBP49765 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.26■□□□□ 0.83
VEGFBP49765 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFBP49765 AC138969.3-201ENST00000546612 1459 ntBASIC20.26■□□□□ 0.83
VEGFBP49765 AC138932.2-201ENST00000548268 1459 ntBASIC20.26■□□□□ 0.83
VEGFBP49765 AC126755.4-201ENST00000549796 1459 ntBASIC20.26■□□□□ 0.83
VEGFBP49765 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFBP49765 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VEGFBP49765 AC079776.1-201ENST00000401540 1152 ntBASIC20.26■□□□□ 0.83
VEGFBP49765 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.26■□□□□ 0.83
VEGFBP49765 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.26■□□□□ 0.83
VEGFBP49765 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFBP49765 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.26■□□□□ 0.83
VEGFBP49765 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.26■□□□□ 0.83
VEGFBP49765 LINC01225-203ENST00000563550 1244 ntBASIC20.26■□□□□ 0.83
VEGFBP49765 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VEGFBP49765 UXT-AS1-201ENST00000590504 1525 ntBASIC20.26■□□□□ 0.83
VEGFBP49765 AKAP8P1-201ENST00000434743 1349 ntBASIC20.26■□□□□ 0.83
VEGFBP49765 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.26■□□□□ 0.83
VEGFBP49765 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VEGFBP49765 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.25■□□□□ 0.83
VEGFBP49765 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.25■□□□□ 0.83
VEGFBP49765 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.25■□□□□ 0.83
VEGFBP49765 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VEGFBP49765 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.25■□□□□ 0.83
VEGFBP49765 MIR658-201ENST00000385210 100 ntBASIC20.25■□□□□ 0.83
VEGFBP49765 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.25■□□□□ 0.83
VEGFBP49765 IGHV3-62-201ENST00000520057 340 ntBASIC20.25■□□□□ 0.83
VEGFBP49765 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.25■□□□□ 0.83
VEGFBP49765 RARRES2P8-201ENST00000566335 367 ntBASIC20.25■□□□□ 0.83
VEGFBP49765 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.25■□□□□ 0.83
VEGFBP49765 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.25■□□□□ 0.83
VEGFBP49765 IGHV3-72-202ENST00000621503 303 ntBASIC20.25■□□□□ 0.83
VEGFBP49765 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VEGFBP49765 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.25■□□□□ 0.83
VEGFBP49765 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VEGFBP49765 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFBP49765 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFBP49765 GNAS-203ENST00000306120 1878 ntBASIC20.24■□□□□ 0.83
VEGFBP49765 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VEGFBP49765 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms