Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.1■□□□□ 0.97
TNNI2P48788 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.1■□□□□ 0.97
TNNI2P48788 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.1■□□□□ 0.97
TNNI2P48788 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNNI2P48788 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.1■□□□□ 0.97
TNNI2P48788 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
TNNI2P48788 AC064836.3-201ENST00000607928 673 ntBASIC21.1■□□□□ 0.97
TNNI2P48788 AL589182.2-201ENST00000619332 1049 ntBASIC21.1■□□□□ 0.97
TNNI2P48788 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TNNI2P48788 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNNI2P48788 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNNI2P48788 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNNI2P48788 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNNI2P48788 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.1■□□□□ 0.97
TNNI2P48788 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.09■□□□□ 0.97
TNNI2P48788 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.09■□□□□ 0.97
TNNI2P48788 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TNNI2P48788 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.09■□□□□ 0.97
TNNI2P48788 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
TNNI2P48788 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.09■□□□□ 0.97
TNNI2P48788 AC093010.1-201ENST00000473625 1624 ntBASIC21.09■□□□□ 0.97
TNNI2P48788 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TNNI2P48788 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 AC023274.1-201ENST00000418278 595 ntBASIC21.09■□□□□ 0.97
TNNI2P48788 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.09■□□□□ 0.97
TNNI2P48788 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.09■□□□□ 0.97
TNNI2P48788 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.09■□□□□ 0.97
TNNI2P48788 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.09■□□□□ 0.97
TNNI2P48788 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.09■□□□□ 0.97
TNNI2P48788 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.09■□□□□ 0.97
TNNI2P48788 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.09■□□□□ 0.97
TNNI2P48788 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.09■□□□□ 0.97
TNNI2P48788 AC004817.3-201ENST00000602957 2129 ntBASIC21.09■□□□□ 0.97
TNNI2P48788 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.09■□□□□ 0.97
TNNI2P48788 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TNNI2P48788 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.09■□□□□ 0.97
TNNI2P48788 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 KRT8P47-201ENST00000604727 1398 ntBASIC21.09■□□□□ 0.97
TNNI2P48788 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.09■□□□□ 0.97
TNNI2P48788 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.09■□□□□ 0.97
TNNI2P48788 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNNI2P48788 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNNI2P48788 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNNI2P48788 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNNI2P48788 AC126763.1-201ENST00000552015 2118 ntBASIC21.08■□□□□ 0.97
TNNI2P48788 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNNI2P48788 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNNI2P48788 COX5BP2-201ENST00000392354 334 ntBASIC21.08■□□□□ 0.97
TNNI2P48788 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TNNI2P48788 AL020989.1-201ENST00000422979 469 ntBASIC21.08■□□□□ 0.97
TNNI2P48788 PMS2P2-201ENST00000425039 1128 ntBASIC21.08■□□□□ 0.97
TNNI2P48788 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.08■□□□□ 0.97
TNNI2P48788 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TNNI2P48788 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.08■□□□□ 0.97
TNNI2P48788 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.08■□□□□ 0.97
TNNI2P48788 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.08■□□□□ 0.97
TNNI2P48788 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TNNI2P48788 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TNNI2P48788 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TNNI2P48788 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNNI2P48788 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TNNI2P48788 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.07■□□□□ 0.96
TNNI2P48788 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TNNI2P48788 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TNNI2P48788 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNNI2P48788 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.07■□□□□ 0.96
TNNI2P48788 DUTP2-201ENST00000519164 463 ntBASIC21.07■□□□□ 0.96
TNNI2P48788 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TNNI2P48788 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.07■□□□□ 0.96
TNNI2P48788 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.07■□□□□ 0.96
TNNI2P48788 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.07■□□□□ 0.96
TNNI2P48788 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.07■□□□□ 0.96
TNNI2P48788 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.07■□□□□ 0.96
TNNI2P48788 AC134684.3-201ENST00000641758 218 ntBASIC21.07■□□□□ 0.96
TNNI2P48788 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNNI2P48788 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
TNNI2P48788 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNNI2P48788 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TNNI2P48788 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.06■□□□□ 0.96
TNNI2P48788 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNNI2P48788 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms