Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFX3P48380 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.78■□□□□ 0.28
RFX3P48380 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX3P48380 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX3P48380 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.77■□□□□ 0.28
RFX3P48380 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RFX3P48380 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX3P48380 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
RFX3P48380 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX3P48380 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX3P48380 AC008687.5-201ENST00000593746 558 ntBASIC16.77■□□□□ 0.28
RFX3P48380 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.77■□□□□ 0.28
RFX3P48380 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX3P48380 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.77■□□□□ 0.28
RFX3P48380 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX3P48380 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
RFX3P48380 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RFX3P48380 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX3P48380 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX3P48380 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
RFX3P48380 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX3P48380 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX3P48380 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
RFX3P48380 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX3P48380 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.77■□□□□ 0.27
RFX3P48380 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFX3P48380 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFX3P48380 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.76■□□□□ 0.27
RFX3P48380 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.76■□□□□ 0.27
RFX3P48380 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.76■□□□□ 0.27
RFX3P48380 AL671277.2-201ENST00000458060 996 ntBASIC16.76■□□□□ 0.27
RFX3P48380 VENTXP5-201ENST00000523979 775 ntBASIC16.76■□□□□ 0.27
RFX3P48380 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.76■□□□□ 0.27
RFX3P48380 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RFX3P48380 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 AC093010.1-201ENST00000473625 1624 ntBASIC16.76■□□□□ 0.27
RFX3P48380 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFX3P48380 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX3P48380 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX3P48380 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RFX3P48380 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX3P48380 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX3P48380 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX3P48380 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX3P48380 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX3P48380 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 HBZP1-201ENST00000354915 429 ntBASIC16.75■□□□□ 0.27
RFX3P48380 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX3P48380 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RFX3P48380 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.75■□□□□ 0.27
RFX3P48380 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.75■□□□□ 0.27
RFX3P48380 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.75■□□□□ 0.27
RFX3P48380 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.75■□□□□ 0.27
RFX3P48380 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX3P48380 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.75■□□□□ 0.27
RFX3P48380 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
RFX3P48380 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.75■□□□□ 0.27
RFX3P48380 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.75■□□□□ 0.27
RFX3P48380 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.75■□□□□ 0.27
RFX3P48380 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFX3P48380 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms