Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NEDD4P46934 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.96■□□□□ 0.95
NEDD4P46934 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
NEDD4P46934 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
NEDD4P46934 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.96■□□□□ 0.95
NEDD4P46934 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.96■□□□□ 0.95
NEDD4P46934 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.96■□□□□ 0.95
NEDD4P46934 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NEDD4P46934 AC116407.2-201ENST00000613639 860 ntBASIC20.96■□□□□ 0.95
NEDD4P46934 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
NEDD4P46934 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.96■□□□□ 0.95
NEDD4P46934 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.96■□□□□ 0.95
NEDD4P46934 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NEDD4P46934 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD4P46934 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
NEDD4P46934 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.95■□□□□ 0.94
NEDD4P46934 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.95■□□□□ 0.94
NEDD4P46934 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.95■□□□□ 0.94
NEDD4P46934 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.95■□□□□ 0.94
NEDD4P46934 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.95■□□□□ 0.94
NEDD4P46934 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NEDD4P46934 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.95■□□□□ 0.94
NEDD4P46934 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 AC134043.2-201ENST00000624206 2238 ntBASIC20.95■□□□□ 0.94
NEDD4P46934 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.95■□□□□ 0.94
NEDD4P46934 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.95■□□□□ 0.94
NEDD4P46934 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.95■□□□□ 0.94
NEDD4P46934 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.95■□□□□ 0.94
NEDD4P46934 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NEDD4P46934 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.95■□□□□ 0.94
NEDD4P46934 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NEDD4P46934 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NEDD4P46934 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.94■□□□□ 0.94
NEDD4P46934 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.94■□□□□ 0.94
NEDD4P46934 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NEDD4P46934 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.94■□□□□ 0.94
NEDD4P46934 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.94■□□□□ 0.94
NEDD4P46934 POM121L3P-201ENST00000419331 1163 ntBASIC20.94■□□□□ 0.94
NEDD4P46934 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.94■□□□□ 0.94
NEDD4P46934 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.94■□□□□ 0.94
NEDD4P46934 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.94■□□□□ 0.94
NEDD4P46934 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
NEDD4P46934 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 IFNL4P1-201ENST00000607083 540 ntBASIC20.94■□□□□ 0.94
NEDD4P46934 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 SIRPAP1-201ENST00000448467 1770 ntBASIC20.94■□□□□ 0.94
NEDD4P46934 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.94■□□□□ 0.94
NEDD4P46934 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NEDD4P46934 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.93■□□□□ 0.94
NEDD4P46934 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.93■□□□□ 0.94
NEDD4P46934 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.93■□□□□ 0.94
NEDD4P46934 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.93■□□□□ 0.94
NEDD4P46934 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 COX5BP2-201ENST00000392354 334 ntBASIC20.93■□□□□ 0.94
NEDD4P46934 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
NEDD4P46934 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NEDD4P46934 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.93■□□□□ 0.94
NEDD4P46934 MIR5100-201ENST00000579544 119 ntBASIC20.93■□□□□ 0.94
NEDD4P46934 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.93■□□□□ 0.94
NEDD4P46934 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.93■□□□□ 0.94
NEDD4P46934 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NEDD4P46934 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NEDD4P46934 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.93■□□□□ 0.94
NEDD4P46934 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms