Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 TMPOP1-202ENST00000424642 1267 ntBASIC16.41■□□□□ 0.22
SLC1A3P43003 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A3P43003 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A3P43003 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC1A3P43003 ZNF444P1-201ENST00000559497 298 ntBASIC16.41■□□□□ 0.22
SLC1A3P43003 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A3P43003 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A3P43003 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 PP12613-201ENST00000424958 2230 ntBASIC16.41■□□□□ 0.22
SLC1A3P43003 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC1A3P43003 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC1A3P43003 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC1A3P43003 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLC1A3P43003 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLC1A3P43003 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 AC006116.8-202ENST00000587620 1550 ntBASIC16.4■□□□□ 0.22
SLC1A3P43003 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SLC1A3P43003 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 MIR662-201ENST00000384847 95 ntBASIC16.4■□□□□ 0.22
SLC1A3P43003 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC1A3P43003 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.4■□□□□ 0.22
SLC1A3P43003 HYMAI.1-201ENST00000620949 238 ntBASIC16.4■□□□□ 0.22
SLC1A3P43003 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC1A3P43003 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC1A3P43003 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC1A3P43003 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A3P43003 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC1A3P43003 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC1A3P43003 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC1A3P43003 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A3P43003 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A3P43003 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A3P43003 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 KRT18P65-201ENST00000439811 1286 ntBASIC16.39■□□□□ 0.21
SLC1A3P43003 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A3P43003 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC1A3P43003 DUX4L26-201ENST00000489078 1255 ntBASIC16.39■□□□□ 0.21
SLC1A3P43003 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms