Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 HOMER2P1-201ENST00000455653 964 ntBASIC17.94■□□□□ 0.46
CCNFP41002 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.94■□□□□ 0.46
CCNFP41002 AL441883.1-201ENST00000566170 1045 ntBASIC17.94■□□□□ 0.46
CCNFP41002 RN7SL850P-201ENST00000579959 291 ntBASIC17.94■□□□□ 0.46
CCNFP41002 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.94■□□□□ 0.46
CCNFP41002 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCNFP41002 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCNFP41002 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCNFP41002 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.93■□□□□ 0.46
CCNFP41002 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCNFP41002 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CCNFP41002 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCNFP41002 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 TSPY5P-201ENST00000426936 936 ntBASIC17.93■□□□□ 0.46
CCNFP41002 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.93■□□□□ 0.46
CCNFP41002 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
CCNFP41002 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.93■□□□□ 0.46
CCNFP41002 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.93■□□□□ 0.46
CCNFP41002 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CCNFP41002 AC006011.2-201ENST00000621313 1158 ntBASIC17.93■□□□□ 0.46
CCNFP41002 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CCNFP41002 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.93■□□□□ 0.46
CCNFP41002 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CCNFP41002 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.93■□□□□ 0.46
CCNFP41002 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCNFP41002 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.92■□□□□ 0.46
CCNFP41002 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCNFP41002 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CCNFP41002 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCNFP41002 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 STARP1-201ENST00000397973 869 ntBASIC17.92■□□□□ 0.46
CCNFP41002 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.92■□□□□ 0.46
CCNFP41002 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.92■□□□□ 0.46
CCNFP41002 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.92■□□□□ 0.46
CCNFP41002 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.92■□□□□ 0.46
CCNFP41002 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCNFP41002 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCNFP41002 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CCNFP41002 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCNFP41002 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms