Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SNCAP37840 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
SNCAP37840 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SNCAP37840 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 MCCD1P1-208ENST00000445732 328 ntBASIC14.7□□□□□ -0.06
SNCAP37840 B3GAT3P1-201ENST00000471720 806 ntBASIC14.7□□□□□ -0.06
SNCAP37840 AC011506.1-201ENST00000474329 610 ntBASIC14.7□□□□□ -0.06
SNCAP37840 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
SNCAP37840 KRT18P41-201ENST00000518924 1277 ntBASIC14.7□□□□□ -0.06
SNCAP37840 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.7□□□□□ -0.06
SNCAP37840 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.7□□□□□ -0.06
SNCAP37840 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.7□□□□□ -0.06
SNCAP37840 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
SNCAP37840 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.7□□□□□ -0.06
SNCAP37840 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.7□□□□□ -0.06
SNCAP37840 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
SNCAP37840 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SNCAP37840 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SNCAP37840 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.7□□□□□ -0.06
SNCAP37840 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNCAP37840 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SNCAP37840 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.69□□□□□ -0.06
SNCAP37840 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.69□□□□□ -0.06
SNCAP37840 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.69□□□□□ -0.06
SNCAP37840 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.69□□□□□ -0.06
SNCAP37840 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 AC006116.8-202ENST00000587620 1550 ntBASIC14.69□□□□□ -0.06
SNCAP37840 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SNCAP37840 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.69□□□□□ -0.06
SNCAP37840 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
SNCAP37840 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SNCAP37840 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SNCAP37840 CD99P1-205ENST00000527459 561 ntBASIC14.69□□□□□ -0.06
SNCAP37840 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.69□□□□□ -0.06
SNCAP37840 AP000692.2-201ENST00000608391 879 ntBASIC14.69□□□□□ -0.06
SNCAP37840 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SNCAP37840 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.69□□□□□ -0.06
SNCAP37840 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
SNCAP37840 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNCAP37840 GMCL1P1-201ENST00000463439 1581 ntBASIC14.68□□□□□ -0.06
SNCAP37840 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SNCAP37840 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.68□□□□□ -0.06
SNCAP37840 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SNCAP37840 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.68□□□□□ -0.06
SNCAP37840 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 AC034236.2-201ENST00000606662 1610 ntBASIC14.68□□□□□ -0.06
SNCAP37840 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms