Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.9■□□□□ 0.46
LSP1P33241 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.9■□□□□ 0.46
LSP1P33241 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
LSP1P33241 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LSP1P33241 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LSP1P33241 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
LSP1P33241 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LSP1P33241 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.89■□□□□ 0.45
LSP1P33241 AC105917.1-201ENST00000506637 2539 ntBASIC17.89■□□□□ 0.45
LSP1P33241 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.89■□□□□ 0.45
LSP1P33241 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
LSP1P33241 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.89■□□□□ 0.45
LSP1P33241 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.89■□□□□ 0.45
LSP1P33241 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 LINC01451-201ENST00000623792 534 ntBASIC17.89■□□□□ 0.45
LSP1P33241 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.89■□□□□ 0.45
LSP1P33241 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 REXO1L11P-201ENST00000620964 1927 ntBASIC17.89■□□□□ 0.45
LSP1P33241 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 AL513523.2-202ENST00000427283 2040 ntBASIC17.89■□□□□ 0.45
LSP1P33241 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.89■□□□□ 0.45
LSP1P33241 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSP1P33241 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.88■□□□□ 0.45
LSP1P33241 OR6D1P-203ENST00000641209 4860 ntBASIC17.88■□□□□ 0.45
LSP1P33241 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.88■□□□□ 0.45
LSP1P33241 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LSP1P33241 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LSP1P33241 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.88■□□□□ 0.45
LSP1P33241 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LSP1P33241 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.88■□□□□ 0.45
LSP1P33241 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.88■□□□□ 0.45
LSP1P33241 AC092118.2-201ENST00000613495 667 ntBASIC17.88■□□□□ 0.45
LSP1P33241 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LSP1P33241 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.88■□□□□ 0.45
LSP1P33241 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 AC092171.3-201ENST00000610122 2651 ntBASIC17.88■□□□□ 0.45
LSP1P33241 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSP1P33241 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LSP1P33241 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.87■□□□□ 0.45
LSP1P33241 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LSP1P33241 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.87■□□□□ 0.45
LSP1P33241 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.87■□□□□ 0.45
LSP1P33241 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSP1P33241 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.87■□□□□ 0.45
LSP1P33241 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.87■□□□□ 0.45
LSP1P33241 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms