Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.55■□□□□ 0.4
VARSP26640 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
VARSP26640 AC116407.4-201ENST00000623319 1061 ntBASIC17.55■□□□□ 0.4
VARSP26640 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VARSP26640 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VARSP26640 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.55■□□□□ 0.4
VARSP26640 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VARSP26640 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.55■□□□□ 0.4
VARSP26640 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.55■□□□□ 0.4
VARSP26640 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 AC026396.1-201ENST00000419388 421 ntBASIC17.54■□□□□ 0.4
VARSP26640 HCG4P8-203ENST00000443049 980 ntBASIC17.54■□□□□ 0.4
VARSP26640 KRT18P38-201ENST00000449496 1282 ntBASIC17.54■□□□□ 0.4
VARSP26640 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.54■□□□□ 0.4
VARSP26640 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 AL136038.3-201ENST00000561909 1096 ntBASIC17.54■□□□□ 0.4
VARSP26640 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.54■□□□□ 0.4
VARSP26640 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 AC093458.2-201ENST00000623150 629 ntBASIC17.54■□□□□ 0.4
VARSP26640 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.54■□□□□ 0.4
VARSP26640 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.54■□□□□ 0.4
VARSP26640 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VARSP26640 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.53■□□□□ 0.4
VARSP26640 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.53■□□□□ 0.4
VARSP26640 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.53■□□□□ 0.4
VARSP26640 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
VARSP26640 STARP1-201ENST00000397973 869 ntBASIC17.53■□□□□ 0.4
VARSP26640 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VARSP26640 AL359075.1-203ENST00000462729 1002 ntBASIC17.53■□□□□ 0.4
VARSP26640 AC092597.1-201ENST00000487352 616 ntBASIC17.53■□□□□ 0.4
VARSP26640 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.53■□□□□ 0.4
VARSP26640 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.53■□□□□ 0.4
VARSP26640 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.53■□□□□ 0.4
VARSP26640 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.53■□□□□ 0.4
VARSP26640 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.53■□□□□ 0.4
VARSP26640 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.53■□□□□ 0.4
VARSP26640 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VARSP26640 AC093010.1-201ENST00000473625 1624 ntBASIC17.53■□□□□ 0.4
VARSP26640 AL391807.1-203ENST00000604392 2365 ntBASIC17.53■□□□□ 0.4
VARSP26640 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VARSP26640 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.53■□□□□ 0.4
VARSP26640 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
VARSP26640 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.52■□□□□ 0.4
VARSP26640 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARSP26640 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARSP26640 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VARSP26640 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms