Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.14■□□□□ 0.49
NFKB1P19838 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.14■□□□□ 0.49
NFKB1P19838 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NFKB1P19838 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NFKB1P19838 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
NFKB1P19838 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.13■□□□□ 0.49
NFKB1P19838 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NFKB1P19838 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 DDX43P3-201ENST00000441064 443 ntBASIC18.13■□□□□ 0.49
NFKB1P19838 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.13■□□□□ 0.49
NFKB1P19838 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.13■□□□□ 0.49
NFKB1P19838 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
NFKB1P19838 AC011498.5-201ENST00000592027 486 ntBASIC18.13■□□□□ 0.49
NFKB1P19838 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NFKB1P19838 AC005332.1-201ENST00000577698 1310 ntBASIC18.13■□□□□ 0.49
NFKB1P19838 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.13■□□□□ 0.49
NFKB1P19838 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NFKB1P19838 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
NFKB1P19838 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.12■□□□□ 0.49
NFKB1P19838 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NFKB1P19838 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.12■□□□□ 0.49
NFKB1P19838 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NFKB1P19838 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.12■□□□□ 0.49
NFKB1P19838 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.12■□□□□ 0.49
NFKB1P19838 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.12■□□□□ 0.49
NFKB1P19838 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.12■□□□□ 0.49
NFKB1P19838 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.12■□□□□ 0.49
NFKB1P19838 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.12■□□□□ 0.49
NFKB1P19838 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.12■□□□□ 0.49
NFKB1P19838 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
NFKB1P19838 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NFKB1P19838 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NFKB1P19838 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.12■□□□□ 0.49
NFKB1P19838 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NFKB1P19838 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NFKB1P19838 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NFKB1P19838 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 FAM86EP-206ENST00000510506 987 ntBASIC18.11■□□□□ 0.49
NFKB1P19838 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.11■□□□□ 0.49
NFKB1P19838 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.11■□□□□ 0.49
NFKB1P19838 AL590326.2-201ENST00000625139 305 ntBASIC18.11■□□□□ 0.49
NFKB1P19838 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.11■□□□□ 0.49
NFKB1P19838 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.11■□□□□ 0.49
NFKB1P19838 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.11■□□□□ 0.49
NFKB1P19838 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 LINC00304-203ENST00000565008 1864 ntBASIC18.11■□□□□ 0.49
NFKB1P19838 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 REXO1L11P-201ENST00000620964 1927 ntBASIC18.11■□□□□ 0.49
NFKB1P19838 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.11■□□□□ 0.49
NFKB1P19838 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NFKB1P19838 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NFKB1P19838 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms