Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CD58P19256 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.14■□□□□ 0.65
CD58P19256 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.14■□□□□ 0.65
CD58P19256 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.14■□□□□ 0.65
CD58P19256 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.14■□□□□ 0.65
CD58P19256 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CD58P19256 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CD58P19256 AC011840.4-201ENST00000578471 627 ntBASIC19.14■□□□□ 0.65
CD58P19256 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 NPAP1P7-201ENST00000613027 823 ntBASIC19.14■□□□□ 0.65
CD58P19256 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.14■□□□□ 0.65
CD58P19256 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.14■□□□□ 0.65
CD58P19256 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.14■□□□□ 0.65
CD58P19256 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.13■□□□□ 0.65
CD58P19256 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.13■□□□□ 0.65
CD58P19256 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 LINC00265-3P-201ENST00000447588 903 ntBASIC19.13■□□□□ 0.65
CD58P19256 TOB2P1-201ENST00000469761 992 ntBASIC19.13■□□□□ 0.65
CD58P19256 AC091607.1-201ENST00000490318 1060 ntBASIC19.13■□□□□ 0.65
CD58P19256 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.13■□□□□ 0.65
CD58P19256 TPSP2-201ENST00000561760 610 ntBASIC19.13■□□□□ 0.65
CD58P19256 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.13■□□□□ 0.65
CD58P19256 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.13■□□□□ 0.65
CD58P19256 MIR3180-1-201ENST00000580374 94 ntBASIC19.13■□□□□ 0.65
CD58P19256 MIR3180-3-201ENST00000584616 94 ntBASIC19.13■□□□□ 0.65
CD58P19256 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.13■□□□□ 0.65
CD58P19256 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.13■□□□□ 0.65
CD58P19256 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.13■□□□□ 0.65
CD58P19256 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.13■□□□□ 0.65
CD58P19256 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CD58P19256 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.13■□□□□ 0.65
CD58P19256 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CD58P19256 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.13■□□□□ 0.65
CD58P19256 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.13■□□□□ 0.65
CD58P19256 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.13■□□□□ 0.65
CD58P19256 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD58P19256 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 AC009949.1-201ENST00000623048 1830 ntBASIC19.12■□□□□ 0.65
CD58P19256 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CD58P19256 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CD58P19256 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.12■□□□□ 0.65
CD58P19256 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.12■□□□□ 0.65
CD58P19256 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CD58P19256 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD58P19256 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.12■□□□□ 0.65
CD58P19256 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.11■□□□□ 0.65
CD58P19256 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.11■□□□□ 0.65
CD58P19256 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD58P19256 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.11■□□□□ 0.65
CD58P19256 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms