Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.53■□□□□ 0.24
PRKCAP17252 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 AL671277.2-201ENST00000458060 996 ntBASIC16.53■□□□□ 0.24
PRKCAP17252 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.53■□□□□ 0.24
PRKCAP17252 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.53■□□□□ 0.24
PRKCAP17252 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 AC024563.2-201ENST00000603282 481 ntBASIC16.53■□□□□ 0.24
PRKCAP17252 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRKCAP17252 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRKCAP17252 LINC01311-201ENST00000565162 1445 ntBASIC16.53■□□□□ 0.24
PRKCAP17252 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.52■□□□□ 0.24
PRKCAP17252 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PRKCAP17252 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.52■□□□□ 0.24
PRKCAP17252 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.52■□□□□ 0.24
PRKCAP17252 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.52■□□□□ 0.24
PRKCAP17252 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.52■□□□□ 0.24
PRKCAP17252 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PRKCAP17252 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PRKCAP17252 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRKCAP17252 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
PRKCAP17252 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.52■□□□□ 0.23
PRKCAP17252 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRKCAP17252 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.52■□□□□ 0.23
PRKCAP17252 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRKCAP17252 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRKCAP17252 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.52■□□□□ 0.23
PRKCAP17252 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.52■□□□□ 0.23
PRKCAP17252 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.52■□□□□ 0.23
PRKCAP17252 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRKCAP17252 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.52■□□□□ 0.23
PRKCAP17252 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PRKCAP17252 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.51■□□□□ 0.23
PRKCAP17252 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRKCAP17252 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PRKCAP17252 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 AL096828.2-201ENST00000567259 1965 ntBASIC16.51■□□□□ 0.23
PRKCAP17252 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PRKCAP17252 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.51■□□□□ 0.23
PRKCAP17252 KRT89P-201ENST00000620027 1478 ntBASIC16.51■□□□□ 0.23
PRKCAP17252 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.51■□□□□ 0.23
PRKCAP17252 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.51■□□□□ 0.23
PRKCAP17252 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.51■□□□□ 0.23
PRKCAP17252 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.51■□□□□ 0.23
PRKCAP17252 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRKCAP17252 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 AC083849.1-201ENST00000615227 514 ntBASIC16.51■□□□□ 0.23
PRKCAP17252 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.51■□□□□ 0.23
PRKCAP17252 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRKCAP17252 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PRKCAP17252 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKCAP17252 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PRKCAP17252 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKCAP17252 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKCAP17252 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PRKCAP17252 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PRKCAP17252 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKCAP17252 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKCAP17252 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKCAP17252 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKCAP17252 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms