Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.5■□□□□ 0.55
H2AFXP16104 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.5■□□□□ 0.55
H2AFXP16104 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.5■□□□□ 0.55
H2AFXP16104 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.5■□□□□ 0.55
H2AFXP16104 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.5■□□□□ 0.55
H2AFXP16104 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.5■□□□□ 0.55
H2AFXP16104 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
H2AFXP16104 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.5■□□□□ 0.55
H2AFXP16104 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.5■□□□□ 0.55
H2AFXP16104 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
H2AFXP16104 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.5■□□□□ 0.55
H2AFXP16104 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.5■□□□□ 0.55
H2AFXP16104 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.5■□□□□ 0.55
H2AFXP16104 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
H2AFXP16104 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2AFXP16104 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
H2AFXP16104 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
H2AFXP16104 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 AC126177.1-201ENST00000547829 2218 ntBASIC18.49■□□□□ 0.55
H2AFXP16104 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.49■□□□□ 0.55
H2AFXP16104 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.49■□□□□ 0.55
H2AFXP16104 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.49■□□□□ 0.55
H2AFXP16104 AC133552.2-202ENST00000575694 574 ntBASIC18.49■□□□□ 0.55
H2AFXP16104 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.49■□□□□ 0.55
H2AFXP16104 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
H2AFXP16104 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 LINC02228-204ENST00000642115 2962 ntBASIC18.49■□□□□ 0.55
H2AFXP16104 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.49■□□□□ 0.55
H2AFXP16104 AC092053.1-201ENST00000605787 1936 ntBASIC18.49■□□□□ 0.55
H2AFXP16104 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2AFXP16104 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
H2AFXP16104 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.49■□□□□ 0.55
H2AFXP16104 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.49■□□□□ 0.55
H2AFXP16104 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
H2AFXP16104 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
H2AFXP16104 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
H2AFXP16104 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.48■□□□□ 0.55
H2AFXP16104 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
H2AFXP16104 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.48■□□□□ 0.55
H2AFXP16104 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.48■□□□□ 0.55
H2AFXP16104 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.48■□□□□ 0.55
H2AFXP16104 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
H2AFXP16104 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.48■□□□□ 0.55
H2AFXP16104 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.48■□□□□ 0.55
H2AFXP16104 AC009949.1-201ENST00000623048 1830 ntBASIC18.48■□□□□ 0.55
H2AFXP16104 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
H2AFXP16104 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.48■□□□□ 0.55
H2AFXP16104 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2AFXP16104 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms