Protein–RNA interactions for Protein: P0C0L4

C4A, Complement C4-A, humanhuman

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4AP0C0L4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
C4AP0C0L4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
C4AP0C0L4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.22■■□□□ 1.15
C4AP0C0L4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.22■■□□□ 1.15
C4AP0C0L4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.22■■□□□ 1.15
C4AP0C0L4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.22■■□□□ 1.15
C4AP0C0L4 AL513210.1-201ENST00000629608 234 ntBASIC22.22■■□□□ 1.15
C4AP0C0L4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.22■■□□□ 1.15
C4AP0C0L4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
C4AP0C0L4 AC087289.5-201ENST00000586076 3175 ntBASIC22.22■■□□□ 1.15
C4AP0C0L4 AC009336.1-201ENST00000608941 1553 ntBASIC22.22■■□□□ 1.15
C4AP0C0L4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
C4AP0C0L4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
C4AP0C0L4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
C4AP0C0L4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.21■■□□□ 1.15
C4AP0C0L4 AC004461.1-201ENST00000412461 403 ntBASIC22.21■■□□□ 1.15
C4AP0C0L4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.21■■□□□ 1.15
C4AP0C0L4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.21■■□□□ 1.15
C4AP0C0L4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC22.21■■□□□ 1.15
C4AP0C0L4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.21■■□□□ 1.15
C4AP0C0L4 AC109462.3-201ENST00000573934 613 ntBASIC22.21■■□□□ 1.15
C4AP0C0L4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.21■■□□□ 1.15
C4AP0C0L4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.21■■□□□ 1.15
C4AP0C0L4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
C4AP0C0L4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
C4AP0C0L4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
C4AP0C0L4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
C4AP0C0L4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
C4AP0C0L4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
C4AP0C0L4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.2■■□□□ 1.14
C4AP0C0L4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.2■■□□□ 1.14
C4AP0C0L4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
C4AP0C0L4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.2■■□□□ 1.14
C4AP0C0L4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
C4AP0C0L4 AC009093.7-201ENST00000623853 1223 ntBASIC22.2■■□□□ 1.14
C4AP0C0L4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
C4AP0C0L4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.2■■□□□ 1.14
C4AP0C0L4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
C4AP0C0L4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
C4AP0C0L4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.2■■□□□ 1.14
C4AP0C0L4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.2■■□□□ 1.14
C4AP0C0L4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
C4AP0C0L4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.2■■□□□ 1.14
C4AP0C0L4 STK19B-204ENST00000512515 211 ntBASIC22.2■■□□□ 1.14
C4AP0C0L4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.2■■□□□ 1.14
C4AP0C0L4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.2■■□□□ 1.14
C4AP0C0L4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.2■■□□□ 1.14
C4AP0C0L4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.2■■□□□ 1.14
C4AP0C0L4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
C4AP0C0L4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C4AP0C0L4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.19■■□□□ 1.14
C4AP0C0L4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
C4AP0C0L4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C4AP0C0L4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.19■■□□□ 1.14
C4AP0C0L4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
C4AP0C0L4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
C4AP0C0L4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C4AP0C0L4 HLA-J-203ENST00000494367 1087 ntBASIC22.19■■□□□ 1.14
C4AP0C0L4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.19■■□□□ 1.14
C4AP0C0L4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
C4AP0C0L4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C4AP0C0L4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.18■■□□□ 1.14
C4AP0C0L4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.18■■□□□ 1.14
C4AP0C0L4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 AL031598.1-201ENST00000561511 1773 ntBASIC22.18■■□□□ 1.14
C4AP0C0L4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.18■■□□□ 1.14
C4AP0C0L4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC22.18■■□□□ 1.14
C4AP0C0L4 ACTG1P4-201ENST00000425123 1122 ntBASIC22.18■■□□□ 1.14
C4AP0C0L4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC22.18■■□□□ 1.14
C4AP0C0L4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC22.18■■□□□ 1.14
C4AP0C0L4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.18■■□□□ 1.14
C4AP0C0L4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.18■■□□□ 1.14
C4AP0C0L4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
C4AP0C0L4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.18■■□□□ 1.14
C4AP0C0L4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
C4AP0C0L4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
C4AP0C0L4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
C4AP0C0L4 COX5BP2-201ENST00000392354 334 ntBASIC22.17■■□□□ 1.14
C4AP0C0L4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms