Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KRT6AP02538 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT6AP02538 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KRT6AP02538 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT6AP02538 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6AP02538 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KRT6AP02538 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT6AP02538 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
KRT6AP02538 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
KRT6AP02538 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT6AP02538 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
KRT6AP02538 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6AP02538 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6AP02538 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
KRT6AP02538 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6AP02538 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6AP02538 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6AP02538 AC005363.2-201ENST00000618631 242 ntBASIC17.28■□□□□ 0.36
KRT6AP02538 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT6AP02538 AC133963.1-201ENST00000504166 1679 ntBASIC17.28■□□□□ 0.36
KRT6AP02538 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT6AP02538 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT6AP02538 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
KRT6AP02538 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT6AP02538 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT6AP02538 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KRT6AP02538 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT6AP02538 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT6AP02538 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT6AP02538 FAM8A6P-201ENST00000407496 1135 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 AL137013.1-201ENST00000432946 1228 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 KRT18P48-201ENST00000434763 852 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 BX664615.1-201ENST00000443558 458 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT6AP02538 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT6AP02538 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT6AP02538 AL441883.1-201ENST00000566170 1045 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KRT6AP02538 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT6AP02538 AC133561.5-201ENST00000635547 218 ntBASIC17.27■□□□□ 0.36
KRT6AP02538 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT6AP02538 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT6AP02538 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT6AP02538 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
KRT6AP02538 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.27■□□□□ 0.35
KRT6AP02538 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT6AP02538 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.27■□□□□ 0.35
KRT6AP02538 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.27■□□□□ 0.35
KRT6AP02538 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
KRT6AP02538 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT6AP02538 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT6AP02538 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT6AP02538 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT6AP02538 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
KRT6AP02538 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT6AP02538 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms