Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIX3O95343 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SIX3O95343 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX3O95343 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 AC113347.1-201ENST00000413321 391 ntBASIC17.43■□□□□ 0.38
SIX3O95343 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.43■□□□□ 0.38
SIX3O95343 AC092597.1-201ENST00000487352 616 ntBASIC17.43■□□□□ 0.38
SIX3O95343 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX3O95343 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX3O95343 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX3O95343 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX3O95343 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX3O95343 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX3O95343 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIX3O95343 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX3O95343 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SIX3O95343 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX3O95343 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SIX3O95343 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX3O95343 AL138688.1-201ENST00000624851 1594 ntBASIC17.42■□□□□ 0.38
SIX3O95343 AC009053.2-201ENST00000563701 2365 ntBASIC17.42■□□□□ 0.38
SIX3O95343 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 TERF1P1-201ENST00000311003 1181 ntBASIC17.42■□□□□ 0.38
SIX3O95343 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
SIX3O95343 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 HLA-F-220ENST00000434407 884 ntBASIC17.42■□□□□ 0.38
SIX3O95343 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 YBX1P2-201ENST00000489612 999 ntBASIC17.42■□□□□ 0.38
SIX3O95343 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.42■□□□□ 0.38
SIX3O95343 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SIX3O95343 AC005363.2-201ENST00000618631 242 ntBASIC17.42■□□□□ 0.38
SIX3O95343 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX3O95343 AL031432.5-201ENST00000641059 760 ntBASIC17.42■□□□□ 0.38
SIX3O95343 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SIX3O95343 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX3O95343 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX3O95343 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.41■□□□□ 0.38
SIX3O95343 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SIX3O95343 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.41■□□□□ 0.38
SIX3O95343 AL137013.1-201ENST00000432946 1228 ntBASIC17.41■□□□□ 0.38
SIX3O95343 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.41■□□□□ 0.38
SIX3O95343 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.41■□□□□ 0.38
SIX3O95343 AC097493.4-201ENST00000641197 219 ntBASIC17.41■□□□□ 0.38
SIX3O95343 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.41■□□□□ 0.38
SIX3O95343 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.41■□□□□ 0.38
SIX3O95343 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.41■□□□□ 0.38
SIX3O95343 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.41■□□□□ 0.38
SIX3O95343 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX3O95343 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.4■□□□□ 0.38
SIX3O95343 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 AP001094.4-201ENST00000579008 2176 ntBASIC17.4■□□□□ 0.38
SIX3O95343 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 HLA-J-201ENST00000462773 1622 ntBASIC17.4■□□□□ 0.38
SIX3O95343 AC073508.3-201ENST00000619697 1419 ntBASIC17.4■□□□□ 0.38
SIX3O95343 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 OR6D1P-202ENST00000641007 5290 ntBASIC17.4■□□□□ 0.38
SIX3O95343 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIX3O95343 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms