Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CEACAM4O75871 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 MRPL20P1-201ENST00000400819 433 ntBASIC16.1■□□□□ 0.17
CEACAM4O75871 METTL21AP1-201ENST00000438852 635 ntBASIC16.1■□□□□ 0.17
CEACAM4O75871 DDX43P3-201ENST00000441064 443 ntBASIC16.1■□□□□ 0.17
CEACAM4O75871 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.1■□□□□ 0.17
CEACAM4O75871 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CEACAM4O75871 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.1■□□□□ 0.17
CEACAM4O75871 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CEACAM4O75871 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.1■□□□□ 0.17
CEACAM4O75871 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.1■□□□□ 0.17
CEACAM4O75871 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.1■□□□□ 0.17
CEACAM4O75871 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CEACAM4O75871 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CEACAM4O75871 ELL2P1-201ENST00000413990 1906 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 CROCCP3-202ENST00000420820 1947 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 BX276092.7-203ENST00000637198 1536 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.09■□□□□ 0.17
CEACAM4O75871 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.09■□□□□ 0.17
CEACAM4O75871 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.09■□□□□ 0.17
CEACAM4O75871 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 AP002414.1-201ENST00000391405 1147 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.09■□□□□ 0.17
CEACAM4O75871 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.09■□□□□ 0.17
CEACAM4O75871 STK19B-204ENST00000512515 211 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.09■□□□□ 0.17
CEACAM4O75871 AC096734.2-201ENST00000562054 433 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 PDPK2P-202ENST00000562415 1191 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 LINC02084-201ENST00000606069 1096 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 GGTLC5P-201ENST00000617623 998 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.09■□□□□ 0.17
CEACAM4O75871 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CEACAM4O75871 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 AL096828.2-201ENST00000567259 1965 ntBASIC16.09■□□□□ 0.17
CEACAM4O75871 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CEACAM4O75871 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CEACAM4O75871 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CEACAM4O75871 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CEACAM4O75871 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CEACAM4O75871 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CEACAM4O75871 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.08■□□□□ 0.16
CEACAM4O75871 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CEACAM4O75871 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CEACAM4O75871 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.08■□□□□ 0.16
CEACAM4O75871 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.08■□□□□ 0.16
CEACAM4O75871 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.08■□□□□ 0.16
CEACAM4O75871 RFPL4AP1-201ENST00000530883 850 ntBASIC16.08■□□□□ 0.16
CEACAM4O75871 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CEACAM4O75871 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.08■□□□□ 0.16
CEACAM4O75871 AL353135.1-201ENST00000606729 504 ntBASIC16.08■□□□□ 0.16
CEACAM4O75871 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CEACAM4O75871 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CEACAM4O75871 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CEACAM4O75871 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CEACAM4O75871 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.08■□□□□ 0.16
CEACAM4O75871 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CEACAM4O75871 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CEACAM4O75871 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CEACAM4O75871 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CEACAM4O75871 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.07■□□□□ 0.16
CEACAM4O75871 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CEACAM4O75871 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CEACAM4O75871 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CEACAM4O75871 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CEACAM4O75871 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CEACAM4O75871 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CEACAM4O75871 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CEACAM4O75871 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CEACAM4O75871 PTCHD3P3-201ENST00000403073 906 ntBASIC16.07■□□□□ 0.16
CEACAM4O75871 CNN2P11-201ENST00000429351 262 ntBASIC16.07■□□□□ 0.16
CEACAM4O75871 RHOQP3-201ENST00000437982 621 ntBASIC16.07■□□□□ 0.16
CEACAM4O75871 IGHV3-52-201ENST00000519770 353 ntBASIC16.07■□□□□ 0.16
CEACAM4O75871 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms