Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC24.58■■□□□ 1.53
BRD4O60885 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
BRD4O60885 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD4O60885 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD4O60885 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
BRD4O60885 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC24.58■■□□□ 1.53
BRD4O60885 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC24.58■■□□□ 1.53
BRD4O60885 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.58■■□□□ 1.53
BRD4O60885 AL591424.1-201ENST00000442569 1213 ntBASIC24.58■■□□□ 1.53
BRD4O60885 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD4O60885 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.58■■□□□ 1.53
BRD4O60885 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC24.58■■□□□ 1.53
BRD4O60885 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.58■■□□□ 1.53
BRD4O60885 AC008735.5-201ENST00000623544 497 ntBASIC24.58■■□□□ 1.53
BRD4O60885 CAND2-206ENST00000626378 333 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD4O60885 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD4O60885 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD4O60885 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD4O60885 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
BRD4O60885 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC24.58■■□□□ 1.53
BRD4O60885 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC24.58■■□□□ 1.53
BRD4O60885 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC24.58■■□□□ 1.53
BRD4O60885 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC24.58■■□□□ 1.52
BRD4O60885 HLA-J-201ENST00000462773 1622 ntBASIC24.58■■□□□ 1.52
BRD4O60885 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC24.58■■□□□ 1.52
BRD4O60885 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
BRD4O60885 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
BRD4O60885 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
BRD4O60885 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC24.57■■□□□ 1.52
BRD4O60885 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 OR7E14P-202ENST00000530490 1290 ntBASIC24.57■■□□□ 1.52
BRD4O60885 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.57■■□□□ 1.52
BRD4O60885 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 AP000867.4-201ENST00000641616 219 ntBASIC24.57■■□□□ 1.52
BRD4O60885 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC24.57■■□□□ 1.52
BRD4O60885 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
BRD4O60885 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
BRD4O60885 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC24.57■■□□□ 1.52
BRD4O60885 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC24.57■■□□□ 1.52
BRD4O60885 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
BRD4O60885 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 MIR1233-2-201ENST00000408138 82 ntBASIC24.56■■□□□ 1.52
BRD4O60885 MIR1233-1-201ENST00000408722 82 ntBASIC24.56■■□□□ 1.52
BRD4O60885 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC24.56■■□□□ 1.52
BRD4O60885 SRP19-202ENST00000445150 833 ntTSL 2 BASIC24.56■■□□□ 1.52
BRD4O60885 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.56■■□□□ 1.52
BRD4O60885 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 AC034105.1-201ENST00000563488 319 ntBASIC24.56■■□□□ 1.52
BRD4O60885 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC24.56■■□□□ 1.52
BRD4O60885 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
BRD4O60885 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
BRD4O60885 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC24.56■■□□□ 1.52
BRD4O60885 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
BRD4O60885 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC24.56■■□□□ 1.52
BRD4O60885 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC24.56■■□□□ 1.52
BRD4O60885 HLA-DQB1-201ENST00000374943 1656 ntBASIC24.56■■□□□ 1.52
BRD4O60885 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BRD4O60885 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.55■■□□□ 1.52
BRD4O60885 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC24.55■■□□□ 1.52
BRD4O60885 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
BRD4O60885 AC027601.4-201ENST00000611259 610 ntBASIC24.55■■□□□ 1.52
BRD4O60885 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC24.55■■□□□ 1.52
BRD4O60885 PXK-206ENST00000463280 2825 ntTSL 2 BASIC24.55■■□□□ 1.52
BRD4O60885 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 AC132938.6-201ENST00000623828 1655 ntBASIC24.55■■□□□ 1.52
BRD4O60885 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC24.55■■□□□ 1.52
BRD4O60885 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
BRD4O60885 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BRD4O60885 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BRD4O60885 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
BRD4O60885 FAM220CP-201ENST00000395253 831 ntBASIC24.54■■□□□ 1.52
BRD4O60885 RPS2P1-201ENST00000434010 821 ntBASIC24.54■■□□□ 1.52
BRD4O60885 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.54■■□□□ 1.52
BRD4O60885 AC092865.5-201ENST00000545435 363 ntBASIC24.54■■□□□ 1.52
BRD4O60885 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC24.54■■□□□ 1.52
BRD4O60885 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
BRD4O60885 AC107918.4-202ENST00000641623 219 ntBASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms