Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF11O60813 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF11O60813 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 AL133373.2-201ENST00000623187 2828 ntBASIC18.06■□□□□ 0.48
PRAMEF11O60813 INTS4P1-201ENST00000438455 1935 ntBASIC18.06■□□□□ 0.48
PRAMEF11O60813 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 NUS1P2-201ENST00000417358 873 ntBASIC18.06■□□□□ 0.48
PRAMEF11O60813 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 PRELID1P1-202ENST00000567272 903 ntBASIC18.06■□□□□ 0.48
PRAMEF11O60813 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 AC012313.10-201ENST00000623509 926 ntBASIC18.06■□□□□ 0.48
PRAMEF11O60813 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 AC134043.2-201ENST00000624206 2238 ntBASIC18.06■□□□□ 0.48
PRAMEF11O60813 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.06■□□□□ 0.48
PRAMEF11O60813 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF11O60813 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
PRAMEF11O60813 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 KRT16P4-201ENST00000453883 522 ntBASIC18.05■□□□□ 0.48
PRAMEF11O60813 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.05■□□□□ 0.48
PRAMEF11O60813 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.05■□□□□ 0.48
PRAMEF11O60813 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.05■□□□□ 0.48
PRAMEF11O60813 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PRAMEF11O60813 GNAS-203ENST00000306120 1878 ntBASIC18.05■□□□□ 0.48
PRAMEF11O60813 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PRAMEF11O60813 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
PRAMEF11O60813 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 REXO1L11P-201ENST00000620964 1927 ntBASIC18.04■□□□□ 0.48
PRAMEF11O60813 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 TSPY19P-201ENST00000418461 509 ntBASIC18.04■□□□□ 0.48
PRAMEF11O60813 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 TSPY18P-201ENST00000441642 509 ntBASIC18.04■□□□□ 0.48
PRAMEF11O60813 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 MIR5100-201ENST00000579544 119 ntBASIC18.04■□□□□ 0.48
PRAMEF11O60813 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PRAMEF11O60813 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
PRAMEF11O60813 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PRAMEF11O60813 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEF11O60813 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms