Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSSCA1O60232 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.57□□□□□ -0.08
SSSCA1O60232 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SSSCA1O60232 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 PCDHB19P-201ENST00000570871 2371 ntBASIC14.56□□□□□ -0.08
SSSCA1O60232 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SSSCA1O60232 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
SSSCA1O60232 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.56□□□□□ -0.08
SSSCA1O60232 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.56□□□□□ -0.08
SSSCA1O60232 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.56□□□□□ -0.08
SSSCA1O60232 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SSSCA1O60232 AP003097.1-201ENST00000530657 1135 ntBASIC14.56□□□□□ -0.08
SSSCA1O60232 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.56□□□□□ -0.08
SSSCA1O60232 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.56□□□□□ -0.08
SSSCA1O60232 AL031985.4-201ENST00000642138 673 ntBASIC14.56□□□□□ -0.08
SSSCA1O60232 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSSCA1O60232 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SSSCA1O60232 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SSSCA1O60232 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SSSCA1O60232 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSSCA1O60232 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.55□□□□□ -0.08
SSSCA1O60232 MIR3180-5-201ENST00000583743 153 ntBASIC14.55□□□□□ -0.08
SSSCA1O60232 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 AC036111.1-201ENST00000533973 1582 ntBASIC14.55□□□□□ -0.08
SSSCA1O60232 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.55□□□□□ -0.08
SSSCA1O60232 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SSSCA1O60232 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.55□□□□□ -0.08
SSSCA1O60232 LINC00304-203ENST00000565008 1864 ntBASIC14.55□□□□□ -0.08
SSSCA1O60232 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.54□□□□□ -0.08
SSSCA1O60232 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 PCDHA14-201ENST00000506751 2298 ntBASIC14.54□□□□□ -0.08
SSSCA1O60232 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SSSCA1O60232 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.54□□□□□ -0.08
SSSCA1O60232 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms