Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 AL121672.3-201ENST00000608644 468 ntBASIC15.89■□□□□ 0.13
TRAF3IP2O43734 AL353801.3-201ENST00000609898 542 ntBASIC15.89■□□□□ 0.13
TRAF3IP2O43734 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP2O43734 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 AL845331.1-201ENST00000424978 1190 ntBASIC15.88■□□□□ 0.13
TRAF3IP2O43734 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 BX276092.5-203ENST00000456199 560 ntBASIC15.88■□□□□ 0.13
TRAF3IP2O43734 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 AP000550.4-202ENST00000639755 178 ntBASIC15.88■□□□□ 0.13
TRAF3IP2O43734 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP2O43734 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AC016734.2-201ENST00000624325 1377 ntBASIC15.87■□□□□ 0.13
TRAF3IP2O43734 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 CHCHD2P8-201ENST00000429873 447 ntBASIC15.87■□□□□ 0.13
TRAF3IP2O43734 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAF3IP2O43734 LINC00896-202ENST00000609602 2128 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms