Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.06■□□□□ 0.48
KDELR3O43731 AL450487.1-201ENST00000426799 995 ntBASIC18.06■□□□□ 0.48
KDELR3O43731 UNC93B7-201ENST00000509439 705 ntBASIC18.06■□□□□ 0.48
KDELR3O43731 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.06■□□□□ 0.48
KDELR3O43731 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
KDELR3O43731 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.06■□□□□ 0.48
KDELR3O43731 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.06■□□□□ 0.48
KDELR3O43731 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.06■□□□□ 0.48
KDELR3O43731 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.06■□□□□ 0.48
KDELR3O43731 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KDELR3O43731 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.06■□□□□ 0.48
KDELR3O43731 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.06■□□□□ 0.48
KDELR3O43731 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KDELR3O43731 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.06■□□□□ 0.48
KDELR3O43731 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
KDELR3O43731 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.05■□□□□ 0.48
KDELR3O43731 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.05■□□□□ 0.48
KDELR3O43731 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.05■□□□□ 0.48
KDELR3O43731 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.05■□□□□ 0.48
KDELR3O43731 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.05■□□□□ 0.48
KDELR3O43731 AC103564.2-201ENST00000432853 1299 ntBASIC18.05■□□□□ 0.48
KDELR3O43731 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.05■□□□□ 0.48
KDELR3O43731 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.05■□□□□ 0.48
KDELR3O43731 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.05■□□□□ 0.48
KDELR3O43731 LINC01711-201ENST00000598340 967 ntBASIC18.05■□□□□ 0.48
KDELR3O43731 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KDELR3O43731 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KDELR3O43731 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KDELR3O43731 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 AC012317.2-201ENST00000623305 2251 ntBASIC18.04■□□□□ 0.48
KDELR3O43731 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KDELR3O43731 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.04■□□□□ 0.48
KDELR3O43731 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.04■□□□□ 0.48
KDELR3O43731 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.04■□□□□ 0.48
KDELR3O43731 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 AC132008.2-207ENST00000454517 770 ntBASIC18.04■□□□□ 0.48
KDELR3O43731 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 AC111152.3-201ENST00000569699 673 ntBASIC18.04■□□□□ 0.48
KDELR3O43731 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.04■□□□□ 0.48
KDELR3O43731 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.04■□□□□ 0.48
KDELR3O43731 IFNL4P1-201ENST00000607083 540 ntBASIC18.04■□□□□ 0.48
KDELR3O43731 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.04■□□□□ 0.48
KDELR3O43731 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.04■□□□□ 0.48
KDELR3O43731 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KDELR3O43731 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.04■□□□□ 0.48
KDELR3O43731 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.04■□□□□ 0.48
KDELR3O43731 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.03■□□□□ 0.48
KDELR3O43731 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms