Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CCP110O43303 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCP110O43303 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCP110O43303 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CCP110O43303 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCP110O43303 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.64■□□□□ 0.74
CCP110O43303 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCP110O43303 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCP110O43303 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCP110O43303 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCP110O43303 MIR564-202ENST00000385049 94 ntBASIC19.64■□□□□ 0.73
CCP110O43303 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.64■□□□□ 0.73
CCP110O43303 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.64■□□□□ 0.73
CCP110O43303 KRT17P2-201ENST00000300992 1314 ntBASIC19.64■□□□□ 0.73
CCP110O43303 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.64■□□□□ 0.73
CCP110O43303 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCP110O43303 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.64■□□□□ 0.73
CCP110O43303 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCP110O43303 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.64■□□□□ 0.73
CCP110O43303 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCP110O43303 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCP110O43303 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 CROCCP2-202ENST00000412962 2773 ntBASIC19.63■□□□□ 0.73
CCP110O43303 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.63■□□□□ 0.73
CCP110O43303 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCP110O43303 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.63■□□□□ 0.73
CCP110O43303 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.63■□□□□ 0.73
CCP110O43303 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.63■□□□□ 0.73
CCP110O43303 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCP110O43303 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.63■□□□□ 0.73
CCP110O43303 AC034236.2-201ENST00000606662 1610 ntBASIC19.63■□□□□ 0.73
CCP110O43303 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.63■□□□□ 0.73
CCP110O43303 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCP110O43303 AL596275.1-201ENST00000423464 877 ntBASIC19.63■□□□□ 0.73
CCP110O43303 FITM1-202ENST00000559294 800 ntBASIC19.63■□□□□ 0.73
CCP110O43303 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.63■□□□□ 0.73
CCP110O43303 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.63■□□□□ 0.73
CCP110O43303 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCP110O43303 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCP110O43303 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.63■□□□□ 0.73
CCP110O43303 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCP110O43303 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCP110O43303 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCP110O43303 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 KRT8P50-201ENST00000562022 1438 ntBASIC19.62■□□□□ 0.73
CCP110O43303 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 MIR1238-201ENST00000408483 83 ntBASIC19.62■□□□□ 0.73
CCP110O43303 CA15P1-201ENST00000481698 905 ntBASIC19.62■□□□□ 0.73
CCP110O43303 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CCP110O43303 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.62■□□□□ 0.73
CCP110O43303 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCP110O43303 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCP110O43303 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.62■□□□□ 0.73
CCP110O43303 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.62■□□□□ 0.73
CCP110O43303 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCP110O43303 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.61■□□□□ 0.73
CCP110O43303 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.61■□□□□ 0.73
CCP110O43303 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CCP110O43303 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.61■□□□□ 0.73
CCP110O43303 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCP110O43303 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms