Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 MIR1238-201ENST00000408483 83 ntBASIC16.97■□□□□ 0.31
CLOCKO15516 AC004951.3-201ENST00000418645 1148 ntBASIC16.97■□□□□ 0.31
CLOCKO15516 AC091390.4-202ENST00000476426 537 ntBASIC16.97■□□□□ 0.31
CLOCKO15516 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.97■□□□□ 0.31
CLOCKO15516 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLOCKO15516 AC026271.3-201ENST00000571884 352 ntBASIC16.97■□□□□ 0.31
CLOCKO15516 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CLOCKO15516 AL031985.4-201ENST00000642138 673 ntBASIC16.97■□□□□ 0.31
CLOCKO15516 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.97■□□□□ 0.31
CLOCKO15516 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.97■□□□□ 0.31
CLOCKO15516 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
CLOCKO15516 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.97■□□□□ 0.31
CLOCKO15516 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.97■□□□□ 0.31
CLOCKO15516 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
CLOCKO15516 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.97■□□□□ 0.31
CLOCKO15516 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CLOCKO15516 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.97■□□□□ 0.31
CLOCKO15516 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.97■□□□□ 0.31
CLOCKO15516 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLOCKO15516 AL355312.1-201ENST00000407115 2176 ntBASIC16.96■□□□□ 0.31
CLOCKO15516 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.96■□□□□ 0.31
CLOCKO15516 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 AC093010.1-201ENST00000473625 1624 ntBASIC16.96■□□□□ 0.31
CLOCKO15516 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.96■□□□□ 0.31
CLOCKO15516 MIR1224-201ENST00000408193 85 ntBASIC16.96■□□□□ 0.31
CLOCKO15516 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLOCKO15516 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.96■□□□□ 0.31
CLOCKO15516 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.96■□□□□ 0.31
CLOCKO15516 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLOCKO15516 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CLOCKO15516 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.96■□□□□ 0.31
CLOCKO15516 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.96■□□□□ 0.31
CLOCKO15516 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLOCKO15516 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
CLOCKO15516 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLOCKO15516 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLOCKO15516 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.96■□□□□ 0.3
CLOCKO15516 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CLOCKO15516 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLOCKO15516 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLOCKO15516 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.95■□□□□ 0.3
CLOCKO15516 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.95■□□□□ 0.3
CLOCKO15516 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.95■□□□□ 0.3
CLOCKO15516 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.95■□□□□ 0.3
CLOCKO15516 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.95■□□□□ 0.3
CLOCKO15516 AC011298.2-201ENST00000617989 482 ntBASIC16.95■□□□□ 0.3
CLOCKO15516 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.95■□□□□ 0.3
CLOCKO15516 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLOCKO15516 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms