Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CHD1O14646 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
CHD1O14646 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHD1O14646 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CHD1O14646 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CHD1O14646 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CHD1O14646 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
CHD1O14646 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC28.55■■■□□ 2.16
CHD1O14646 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC28.55■■■□□ 2.16
CHD1O14646 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC28.55■■■□□ 2.16
CHD1O14646 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC28.55■■■□□ 2.16
CHD1O14646 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC28.55■■■□□ 2.16
CHD1O14646 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHD1O14646 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC28.55■■■□□ 2.16
CHD1O14646 PIN1P1-201ENST00000412108 996 ntBASIC28.55■■■□□ 2.16
CHD1O14646 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC28.55■■■□□ 2.16
CHD1O14646 SSH2-211ENST00000590153 570 ntTSL 4 BASIC28.55■■■□□ 2.16
CHD1O14646 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC28.55■■■□□ 2.16
CHD1O14646 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD1O14646 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD1O14646 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC28.54■■■□□ 2.16
CHD1O14646 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHD1O14646 TSSK5P-201ENST00000423978 907 ntBASIC28.54■■■□□ 2.16
CHD1O14646 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHD1O14646 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC28.54■■■□□ 2.16
CHD1O14646 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC28.54■■■□□ 2.16
CHD1O14646 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC28.54■■■□□ 2.16
CHD1O14646 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD1O14646 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
CHD1O14646 AL161938.1-201ENST00000569833 2180 ntBASIC28.54■■■□□ 2.16
CHD1O14646 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC28.54■■■□□ 2.16
CHD1O14646 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC28.54■■■□□ 2.16
CHD1O14646 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CHD1O14646 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC28.53■■■□□ 2.16
CHD1O14646 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC28.53■■■□□ 2.16
CHD1O14646 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
CHD1O14646 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC28.53■■■□□ 2.16
CHD1O14646 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC28.53■■■□□ 2.16
CHD1O14646 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC28.53■■■□□ 2.16
CHD1O14646 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC28.53■■■□□ 2.16
CHD1O14646 AC009118.2-201ENST00000613275 655 ntBASIC28.53■■■□□ 2.16
CHD1O14646 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC28.53■■■□□ 2.16
CHD1O14646 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHD1O14646 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CHD1O14646 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHD1O14646 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
CHD1O14646 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHD1O14646 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 KRT17P7-201ENST00000451704 1104 ntBASIC28.52■■■□□ 2.16
CHD1O14646 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
CHD1O14646 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC28.52■■■□□ 2.16
CHD1O14646 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC28.52■■■□□ 2.16
CHD1O14646 AL049812.1-201ENST00000432563 2267 ntBASIC28.52■■■□□ 2.16
CHD1O14646 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC28.52■■■□□ 2.16
CHD1O14646 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CHD1O14646 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC28.52■■■□□ 2.16
CHD1O14646 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CHD1O14646 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC28.52■■■□□ 2.16
CHD1O14646 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC28.52■■■□□ 2.16
CHD1O14646 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD1O14646 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC28.52■■■□□ 2.16
CHD1O14646 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC28.51■■■□□ 2.16
CHD1O14646 AKAP8P1-201ENST00000434743 1349 ntBASIC28.51■■■□□ 2.16
CHD1O14646 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC28.51■■■□□ 2.16
CHD1O14646 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1O14646 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1O14646 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1O14646 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC28.51■■■□□ 2.15
CHD1O14646 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC28.51■■■□□ 2.15
CHD1O14646 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1O14646 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1O14646 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1O14646 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CHD1O14646 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC28.5■■■□□ 2.15
CHD1O14646 LINC01006-201ENST00000333319 2292 ntBASIC28.5■■■□□ 2.15
CHD1O14646 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
CHD1O14646 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1O14646 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC28.5■■■□□ 2.15
CHD1O14646 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC28.5■■■□□ 2.15
CHD1O14646 SPDYE7P-202ENST00000420373 878 ntBASIC28.5■■■□□ 2.15
CHD1O14646 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1O14646 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1O14646 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1O14646 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC28.5■■■□□ 2.15
CHD1O14646 SLC25A6P2-201ENST00000497974 877 ntBASIC28.5■■■□□ 2.15
CHD1O14646 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC28.5■■■□□ 2.15
CHD1O14646 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CHD1O14646 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC28.49■■■□□ 2.15
CHD1O14646 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CHD1O14646 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms