Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AL023973.1-201ENST00000624619 620 ntBASIC16.71■□□□□ 0.27
AP3D1O14617 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3D1O14617 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.71■□□□□ 0.27
AP3D1O14617 AL024508.2-201ENST00000607749 1894 ntBASIC16.71■□□□□ 0.27
AP3D1O14617 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.71■□□□□ 0.27
AP3D1O14617 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AP3D1O14617 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
AP3D1O14617 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.71■□□□□ 0.26
AP3D1O14617 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.71■□□□□ 0.26
AP3D1O14617 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
AP3D1O14617 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.71■□□□□ 0.26
AP3D1O14617 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3D1O14617 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
AP3D1O14617 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
AP3D1O14617 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3D1O14617 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3D1O14617 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3D1O14617 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 KRT18P55-202ENST00000578578 1546 ntBASIC16.7■□□□□ 0.26
AP3D1O14617 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3D1O14617 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3D1O14617 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AP3D1O14617 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
AP3D1O14617 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3D1O14617 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3D1O14617 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 GCSHP2-201ENST00000560971 527 ntBASIC16.69■□□□□ 0.26
AP3D1O14617 MIR3917-201ENST00000580971 93 ntBASIC16.69■□□□□ 0.26
AP3D1O14617 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.69■□□□□ 0.26
AP3D1O14617 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
AP3D1O14617 AL157888.1-201ENST00000631930 593 ntBASIC16.69■□□□□ 0.26
AP3D1O14617 AC097493.4-201ENST00000641197 219 ntBASIC16.69■□□□□ 0.26
AP3D1O14617 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
AP3D1O14617 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
AP3D1O14617 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3D1O14617 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
AP3D1O14617 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3D1O14617 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms