Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN4O14493 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CLDN4O14493 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN4O14493 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLDN4O14493 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN4O14493 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN4O14493 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLDN4O14493 SLC25A6P5-201ENST00000435663 894 ntBASIC16.8■□□□□ 0.28
CLDN4O14493 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLDN4O14493 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLDN4O14493 AC074051.2-201ENST00000565115 352 ntBASIC16.8■□□□□ 0.28
CLDN4O14493 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN4O14493 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN4O14493 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
CLDN4O14493 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN4O14493 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN4O14493 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN4O14493 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN4O14493 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN4O14493 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN4O14493 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN4O14493 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 AC097374.2-201ENST00000618617 1306 ntBASIC16.79■□□□□ 0.28
CLDN4O14493 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN4O14493 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 AL845331.1-201ENST00000424978 1190 ntBASIC16.79■□□□□ 0.28
CLDN4O14493 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN4O14493 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN4O14493 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN4O14493 AC009533.2-201ENST00000543664 586 ntBASIC16.79■□□□□ 0.28
CLDN4O14493 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN4O14493 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN4O14493 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN4O14493 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN4O14493 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDN4O14493 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN4O14493 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN4O14493 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN4O14493 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms