Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.82■□□□□ 0.6
SOX1O00570 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX1O00570 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX1O00570 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.82■□□□□ 0.6
SOX1O00570 AC243562.1-201ENST00000560672 389 ntBASIC18.82■□□□□ 0.6
SOX1O00570 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.82■□□□□ 0.6
SOX1O00570 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.82■□□□□ 0.6
SOX1O00570 MIR4525-201ENST00000580000 75 ntBASIC18.82■□□□□ 0.6
SOX1O00570 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.82■□□□□ 0.6
SOX1O00570 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX1O00570 AC004233.3-201ENST00000607794 1269 ntBASIC18.82■□□□□ 0.6
SOX1O00570 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX1O00570 AL133338.1-201ENST00000565695 1517 ntBASIC18.82■□□□□ 0.6
SOX1O00570 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX1O00570 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX1O00570 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SOX1O00570 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SOX1O00570 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX1O00570 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX1O00570 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX1O00570 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX1O00570 FP475955.4-201ENST00000623131 1990 ntBASIC18.81■□□□□ 0.6
SOX1O00570 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX1O00570 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX1O00570 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.81■□□□□ 0.6
SOX1O00570 ACA64.2-201ENST00000459014 129 ntBASIC18.81■□□□□ 0.6
SOX1O00570 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 AC069120.2-201ENST00000524091 540 ntBASIC18.81■□□□□ 0.6
SOX1O00570 FAM86C2P-203ENST00000528684 1004 ntBASIC18.81■□□□□ 0.6
SOX1O00570 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 AC026150.2-201ENST00000564693 1156 ntBASIC18.81■□□□□ 0.6
SOX1O00570 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.81■□□□□ 0.6
SOX1O00570 AC068587.10-201ENST00000641210 219 ntBASIC18.81■□□□□ 0.6
SOX1O00570 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX1O00570 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX1O00570 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.81■□□□□ 0.6
SOX1O00570 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX1O00570 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX1O00570 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX1O00570 AL353593.2-201ENST00000602529 1483 ntBASIC18.8■□□□□ 0.6
SOX1O00570 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
SOX1O00570 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 AC103564.2-201ENST00000432853 1299 ntBASIC18.8■□□□□ 0.6
SOX1O00570 SPDYE14P-201ENST00000442619 822 ntBASIC18.8■□□□□ 0.6
SOX1O00570 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 GIMAP3P-201ENST00000495150 836 ntBASIC18.8■□□□□ 0.6
SOX1O00570 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.8■□□□□ 0.6
SOX1O00570 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.8■□□□□ 0.6
SOX1O00570 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX1O00570 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 IGHV3-72-202ENST00000621503 303 ntBASIC18.8■□□□□ 0.6
SOX1O00570 SIRPAP1-201ENST00000448467 1770 ntBASIC18.8■□□□□ 0.6
SOX1O00570 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX1O00570 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 AC099778.1-201ENST00000568593 1911 ntBASIC18.8■□□□□ 0.6
SOX1O00570 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX1O00570 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
SOX1O00570 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SOX1O00570 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SOX1O00570 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SOX1O00570 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.79■□□□□ 0.6
SOX1O00570 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 MIR658-201ENST00000385210 100 ntBASIC18.79■□□□□ 0.6
SOX1O00570 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SOX1O00570 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.79■□□□□ 0.6
SOX1O00570 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
SOX1O00570 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SOX1O00570 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.79■□□□□ 0.6
SOX1O00570 SPTSSB-204ENST00000617024 1292 ntBASIC18.79■□□□□ 0.6
SOX1O00570 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SOX1O00570 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SOX1O00570 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms