Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.31■□□□□ 0.84
SYCE3A1L190 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.31■□□□□ 0.84
SYCE3A1L190 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.31■□□□□ 0.84
SYCE3A1L190 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SYCE3A1L190 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.31■□□□□ 0.84
SYCE3A1L190 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SYCE3A1L190 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SYCE3A1L190 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SYCE3A1L190 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.3■□□□□ 0.84
SYCE3A1L190 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYCE3A1L190 RNA5SP413-201ENST00000516373 109 ntBASIC20.3■□□□□ 0.84
SYCE3A1L190 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.3■□□□□ 0.84
SYCE3A1L190 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SYCE3A1L190 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SYCE3A1L190 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.3■□□□□ 0.84
SYCE3A1L190 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.3■□□□□ 0.84
SYCE3A1L190 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SYCE3A1L190 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SYCE3A1L190 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
SYCE3A1L190 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SYCE3A1L190 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 AC079328.2-201ENST00000561241 3354 ntBASIC20.29■□□□□ 0.84
SYCE3A1L190 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 AC104771.1-201ENST00000603335 964 ntBASIC20.29■□□□□ 0.84
SYCE3A1L190 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SYCE3A1L190 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SYCE3A1L190 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SYCE3A1L190 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.29■□□□□ 0.84
SYCE3A1L190 AC011270.2-201ENST00000624293 2550 ntBASIC20.29■□□□□ 0.84
SYCE3A1L190 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.29■□□□□ 0.84
SYCE3A1L190 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SYCE3A1L190 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.28■□□□□ 0.84
SYCE3A1L190 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.28■□□□□ 0.84
SYCE3A1L190 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.28■□□□□ 0.84
SYCE3A1L190 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.28■□□□□ 0.84
SYCE3A1L190 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SYCE3A1L190 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SYCE3A1L190 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 AC009949.1-201ENST00000623048 1830 ntBASIC20.28■□□□□ 0.84
SYCE3A1L190 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
SYCE3A1L190 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 AL353807.1-201ENST00000427475 662 ntBASIC20.28■□□□□ 0.84
SYCE3A1L190 MFAP1P1-201ENST00000442257 1255 ntBASIC20.28■□□□□ 0.84
SYCE3A1L190 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.28■□□□□ 0.84
SYCE3A1L190 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SYCE3A1L190 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SYCE3A1L190 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SYCE3A1L190 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms