Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 LINC00602-201ENST00000629776 2065 ntBASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LINC00959A0A1B0GUT2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LINC00959A0A1B0GUT2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 HLA-J-201ENST00000462773 1622 ntBASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 MMP23A-201ENST00000234610 1017 ntBASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 ECEL1P2-202ENST00000465689 757 ntBASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 AC010947.1-201ENST00000623454 693 ntBASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00959A0A1B0GUT2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms