Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 ELK2BP-201ENST00000415014 1224 ntBASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 KRT18P2-201ENST00000447938 1258 ntBASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC187A0A096LP49 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 AC093010.1-201ENST00000473625 1624 ntBASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 NCF1C-201ENST00000438382 1427 ntBASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 MIR4751-201ENST00000578027 74 ntBASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 AL596442.2-201ENST00000610240 980 ntBASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC187A0A096LP49 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 AL353593.2-201ENST00000602529 1483 ntBASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 AC018445.3-201ENST00000624177 1945 ntBASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC187A0A096LP49 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms