Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC008894.3-201ENST00000624324 3103 ntBASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 AC106886.4-201ENST00000623557 2502 ntBASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV18A0A075B6X5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 AL024508.2-201ENST00000607749 1894 ntBASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 LINC00304-203ENST00000565008 1864 ntBASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV18A0A075B6X5 HOXB1-202ENST00000577092 1414 ntBASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 HLA-J-201ENST00000462773 1622 ntBASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV18A0A075B6X5 FSCN1P1-201ENST00000568912 1481 ntBASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms